Gene detail information of Glyur000447s00016635 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05900.1 | 2.00E-05 | neurofilament protein-related |
| NR | XP_006589099.1 | 9.24E-50 | PREDICTED: enolase-phosphatase E1-like isoform X3 [Glycine max] |
| trEMBL | tr|I1LAY3|I1LAY3_SOYBN | 3.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G28270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00447 | 19748 | 24745 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.729 |
| SRR1783600 | control | 40.877 |
| SRR1783602 | moderate drought stress | 61.136 |
| SRR1811619 | moderate drought stress | 61.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.836 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.539 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.820 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.793 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.347 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.773 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.778 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.336 |
| SRR2868004 | Drought Stress (root) | 17.995 |
| SRR2967015 | Control (root) | 20.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.237 |
| SRR9715740 | Leaf | 6.659 |
| SRR9715741 | Leaf | 4.097 |
| SRR9715739 | Root | 1.136 |
| SRR9715742 | Root | 5.154 |
| SRR9715743 | Root | 4.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.133 |
| SRR8749028 | MeJA induced 9h | 4.364 |
| SRR8749029 | MeJA induced 9h | 4.013 |
| SRR8749030 | Uninduced | 4.538 |
| SRR8749031 | Uninduced | 4.463 |
| SRR8749032 | Uninduced | 4.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.127 |
| SRR8400027 | Control - Root | 25.902 |