Gene detail information of Glyur000446s00029770.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38970.2 | 4.00E-18 | brassinosteroid-6-oxidase 1 |
| NR | XP_010257975.1 | 2.47E-24 | PREDICTED: cytochrome P450 85A1-like [Nelumbo nucifera] |
| Swissprot | tr|Q8GSQ1|C85A1_ORYSJ | 7.00E-24 | Cytochrome P450 85A1 |
| trEMBL | tr|A0A067L291|A0A067L291_JATCU | 3.00E-23 | Uncharacterized protein {ECO:0000313|EMBL:KDP41328.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00446 | 85112 | 87328 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP85A1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K12640 | CYP85A2, BR6OX2 | EC:1.14.-.- | Brassinosteroid biosynthesis | map00905 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000446s00029770.1 | PF00067.17 | p450 | 7 | 50 | 5.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.111 |
| SRR1783600 | control | 0.150 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.201 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.269 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.370 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.812 |
| SRR2868004 | Drought Stress (root) | 1.039 |
| SRR2967015 | Control (root) | 0.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.211 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.075 |
| SRR9715739 | Root | 0.342 |
| SRR9715742 | Root | 0.186 |
| SRR9715743 | Root | 0.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.058 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.125 |
| SRR8400027 | Control - Root | 1.231 |