Gene detail information of Glyur000446s00029760 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69200.1 | 6.00E-179 | fructokinase-like 2 |
| NR | XP_004490214.1 | 0 | PREDICTED: uncharacterized protein LOC101493906 [Cicer arietinum] |
| COG | YP_002521328.1 | 2.00E-28 | putative fructokinase [Thermomicrobium roseum DSM 5159] |
| Swissprot | tr|F4I0K2|SCKL2_ARATH | 0 | Fructokinase-like 2, chloroplastic {ECO:0000312|EMBL:AEE34893.1} (Precursor) |
| trEMBL | tr|G7JY18|G7JY18_MEDTR | 0 | PfkB family carbohydrate kinase {ECO:0000313|EMBL:AES97072.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00446 | 31763 | 35680 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000446s00029760.1 | PF00294.19 | PfkB | 230 | 496 | 1.20E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.613 |
| SRR1783600 | control | 4.785 |
| SRR1783602 | moderate drought stress | 4.298 |
| SRR1811619 | moderate drought stress | 4.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.985 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.161 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.360 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.365 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.661 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.527 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.543 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.411 |
| SRR2868004 | Drought Stress (root) | 5.325 |
| SRR2967015 | Control (root) | 5.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.213 |
| SRR9715740 | Leaf | 22.058 |
| SRR9715741 | Leaf | 9.511 |
| SRR9715739 | Root | 1.199 |
| SRR9715742 | Root | 4.236 |
| SRR9715743 | Root | 3.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.466 |
| SRR8749028 | MeJA induced 9h | 9.784 |
| SRR8749029 | MeJA induced 9h | 11.272 |
| SRR8749030 | Uninduced | 2.207 |
| SRR8749031 | Uninduced | 3.520 |
| SRR8749032 | Uninduced | 3.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.642 |
| SRR8400027 | Control - Root | 7.738 |