Gene detail information of Glyur000446s00029758 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69210.1 | 9.00E-68 | Uncharacterised protein family UPF0090 |
| NR | XP_004490209.1 | 5.83E-151 | PREDICTED: uncharacterized protein LOC101492481 [Cicer arietinum] |
| COG | YP_001838906.1 | 3.00E-08 | hypothetical protein LEPBI_I1523 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] |
| trEMBL | tr|G7JY21|G7JY21_MEDTR | 9.00E-147 | DUF150 family protein {ECO:0000313|EMBL:AES97075.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00446 | 6178 | 9884 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000446s00029758.1 | PF02576.12 | DUF150 | 110 | 263 | 3.80E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.100 |
| SRR1783600 | control | 7.225 |
| SRR1783602 | moderate drought stress | 16.438 |
| SRR1811619 | moderate drought stress | 16.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.249 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.067 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.884 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.401 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.864 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.963 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.343 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.940 |
| SRR2868004 | Drought Stress (root) | 8.669 |
| SRR2967015 | Control (root) | 9.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.365 |
| SRR9715740 | Leaf | 4.221 |
| SRR9715741 | Leaf | 8.863 |
| SRR9715739 | Root | 4.719 |
| SRR9715742 | Root | 9.629 |
| SRR9715743 | Root | 8.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.875 |
| SRR8749028 | MeJA induced 9h | 5.898 |
| SRR8749029 | MeJA induced 9h | 5.137 |
| SRR8749030 | Uninduced | 1.513 |
| SRR8749031 | Uninduced | 0.449 |
| SRR8749032 | Uninduced | 1.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.942 |
| SRR8400027 | Control - Root | 8.572 |