Gene detail

Gene detail information of Glyur000445s00020014

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G12430.1	armadillo repeat kinesin 3
NR	XP_004511636.1	PREDICTED: armadillo repeat-containing kinesin-like protein 3-like [Cicer arietinum]
Swissprot	tr\|Q9FZ06\|ARK3_ARATH	Armadillo repeat-containing kinesin-like protein 3
trEMBL	tr\|I1JA00\|I1JA00_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000445s00020014.1
CCAAATTTAAAAAGAAAAATACGCACTACTCTCCTTCGGAACCCGAATTTATGTGCGTCACATCTGTGGCGGTTGCGGGTTGAAGAAGTGAAGTGCAGTGTAGTGCAACTAACTGCATACATATTCATCACACTTCACACAAGTGGTTTTGTTTCCTTAATGAGCAAACCCTCTCTTGTTAAAATCTGAAGAATGGCCACCTCTCAAGGTGGTGGAAGCAGTTACAGAAACGGCACTCACAATCACAGCAACAGTAACAGAAGCTCTCTCAAGCCACATGTGAATGTGAAGCCCAAGCCCACTCAACGACGGAATAGCACCGGCACCACCGCCAAGGACCATGCTCATGCCACAACCACTGTTCCTGGAAGAGTTAGAGTAGCCGTTAGGTTGCGGCCCCGGAATGCGGAGGAATCAGTGGCAGATGCTGATTTTGCTGACTGTGTGGAACTACAGCCCGAGCTCAAAAGGTTAAAGCTTCGGAAGAACAATTGGGATGCAGAGACTTATGAATTTGATGAGGTGCTCACTGAATTCGCGTCACAGAAACGTGTTTATGAAGTTGTGGCCAGGCCTGTTGTGGAGGTGGGTATTCATCACCCGAGTGTACTGGAAGGCTACAATGGGACAATTATGGCATATGGGCAGACTGGTACTGGTAAAACTTATACTCTTGGACGACTTGGGGAAGAAGACACAGCAGCACGTGGAATAATGGTACGAGCTATGGAGGATATTTTTGCAGATGTTTCTCTGGAAACTGATTCAGTCTCAGTCTCGTATTTGCAGCTTTATATGGAGACNATACAAGATCTGCTTGACCCTGCCAATGATAACATAGCCATCGTAGAAGATCACAAAACTGGTGATGTTTCACTACCTGGAGCTAGCCTTGTTGAGATTAGGGACCAGCAGAGTTTTGTAGAACTACTAAGATTAGGAGAGGCTCACCGCTTTGCTGCAAATACAAAACTGAATACTGAATCTTCTCGAAGTCATGCTATTCTGATGGTGCACGTAAAGAGATCCATCAAGGGAAGAGATGGTACTCATTCAAGCGAAAATGGCAATCACCCACACATGGTTAAATCGTTAAAGCCGCCTATTGTTCGGAAAGGCAAGTTGGTTGTTGTAGATCTTGCTGGTTCAGAACGAATTGACAAGTCAGGAAGTGAAGGACATATGTTAGAAGAAGCCAAATCTATCAATCTGTCTTTGAGTGCATTGGGGAAGTGTATTAATGCACTTGCAGAGAATAGTGCGCATGTGCCATTTCGTGACTCAAAGCTTACTAGATTGTTACGTGATTCATTTGGAGGTACAGCAAGAACTTCACTTGTCATTACTATTGGGCCGTCTCCACGGCATAGGGGAGAAACTGCCAGTACTATAATGTTTGGGCAAAGGGCTATGAAGGTTGAAAACATGGTAAAGTTAAAGGAGGAATTTGATTACAAAAGCTTATCTAGAAGGCTAGACATAGAATTAGATAAACTCATTATGGAACATGAAAGACAGCAGAAGGCATTTGAGGATGAAATTGAAAGGATAGCCACTGAAGCACAACATCGGATATCTGAGGCTGAAAGAAACTATGTAGATTCATTGGAGAAGGAAAGGTCAAAATATCAGAAAGACTATATGGAATCGATTAAGAAGCTTGAAGAGAAGTTGGTGATGAATCAACGAAAGAATGAGGAATCTCACATGAAATCAAGTGGANAGGTGTCTGCCGAGGAACTGGCTGATTTGAGAAAAATGCTTCAAAAGGAGACTTTTTTAAGAAAAGCTGCTGAAGGGGAGGTGAATAATTTGAAGATTCAAGTGGCTGAACTAAAACAGTCAGATGCATCAGGAAAGTCAGAGATCTTAAAACTTCATAAGATGCTGGAAGATGAGGCACATCAGAAAGAGAAACTTGAAGGAGAAATAGCAATATTACAAAGTCAATTGTTGCAGTTAAGTCTTGAAGCTGATGAGACAAGACAACAACCAGACAGGGGTGGGTTTGAAAAAGAAGTGGGTGGTCTTGATTCTCTCACTTCCCAAGTTAAGCATCAGCAGCAAGCTTCAGGAAATGGAGAGAAGCCTTCAATAGCAAAGCTCTTTGAGCAAGGTATGGGATTGCAGAAGATTTTGTCATTGCTTGAAGCAGAAGATGCCGATGTGCGAATCCATGCTGTGAAAGTTGTAGCAAATCTAGCTGCTGAAGAAACAAATCAGGGGAAGATTGTAGAAGCGGGAGGGCTTACATCCTTGCTTACGCTGCTTAAGACCTCACAAGATGAGACCATACATAGAGTTGCTGCAGGTGCTATTGCAAATTTGGCAATGAATGAAACCAACCAAGAACTCATTATGGCCCAAGGGGGCATTAGTTTGCTGTCAATGACTGCAGCCAATGCTGAAGATCCTCAAACACTTCGAATGGTTGCTGGAGCCATTGCTAATCTTTGTGGCAATGATAAGCTACAAACAAAATTAAGGAGCGAAGGTGGTATCAAGGCACTNCTGGGAATGGTCAGATGCAGACATCCTGATGTGCATGCACAGGTTGCTCGTGGAATAGCAAATTTTGCAAAATGTGAGTCAAGAGCATCTAGTCAAGGGACAAAGAGTGGGAGATCTTTCCTTATTGAGGATGGTGCCCTTTCATGGATCGTGCAAAATGCAAATAACGAAGCCTCATCAATTAGGCGTCATATTGAGCTTGCACTCTGTCACTTAGCACAACATGAAGTAAATGCAATAGACATGATTAATGAGGGTGCATTATGGGAGCTAGTTCGTATCTCGCNAGATTGTTCAAGAGAAGACATAAAGACTCTTGCACATCGGACACTAGTCTCCAGCCCCACTTTCCAAANCGAAATGAGGCGTTTGCGTGTGAATTACTGAAGAATTCTGTAGAAAACTACAGTGGGCTGAGAGATCCGAGCTTTTAATTATTTTGGATGTATTACTTTTTATAAGTAATCAAGCAGGAAGGCTTTCTTCAGTGTTCTAGCTGAAAGTCTAGACAAGCGTCCGTGGGTTCTTGTATGTGGTTGATCCATCAATGAATGGCCATAATTTAATCAAAAGTCAACGTGGTGTCCCTCTGGTCTGCTTGCTAGTGTCTAGCTTCTGGAATGTAAATTGATTTGTATTTGTATATGAAATAAATAGAGGTAAGGGTANCGACAGTTTTGAATTTCTCCATGAAATGGCTCGTTGCCATTCATAACGCCAATAGTTAGNTTGTTGATTAGTGATGATTTGAATTGTTTCCACAACCGTTAAAAGCGTGGACCCCGTGATCNTTCATTTTATTCCATATTGAGTGTCCCTACCAAGTTGCAAAAGCCAATGTATTATTAACATGATTATTGCTTTTGATAATTGGGAGGAGTTAAGTANGCATGACAATAAAGGCATATGCGCCTCAAACAAACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00445	112216	121732	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005488 binding

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000445s00020014.1	PF00225.18	Kinesin	66	409	1.30E-92
Glyur000445s00020014.1	PF00514.18	Arm	680	713	3.70E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.562
SRR1783600	control	10.613
SRR1783602	moderate drought stress	9.539
SRR1811619	moderate drought stress	9.497

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.605
DRR006520	Root Summer glycyrrhizin high producing strain	12.471
DRR006521	Root Winter glycyrrhizin high producing strain	2.257
DRR006522	Root Winter glycyrrhizin high producing strain	2.039
DRR006523	Root Summer glycyrrhizin low producing strain	14.282
DRR006524	Root Summer glycyrrhizin low producing strain	14.223
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.628
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.463

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	16.663
SRR2868004	Drought Stress (root)	11.223
SRR2967015	Control (root)	14.545

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.098
SRR9715740	Leaf	6.355
SRR9715741	Leaf	8.587
SRR9715739	Root	0.631
SRR9715742	Root	6.816
SRR9715743	Root	6.393

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.522
SRR8749028	MeJA induced 9h	7.973
SRR8749029	MeJA induced 9h	4.532
SRR8749030	Uninduced	1.605
SRR8749031	Uninduced	1.227
SRR8749032	Uninduced	0.973

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.485
SRR8400027	Control - Root	18.230