Gene detail information of Glyur000445s00020007 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45180.1 | 8.00E-23 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_004498751.1 | 2.79E-55 | PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cicer arietinum] |
| Swissprot | tr|Q39176|ERLI1_ARATH | 3.00E-32 | Lipid transfer protein EARLI 1 (Precursor) |
| trEMBL | tr|G7I723|G7I723_MEDTR | 1.00E-54 | Lipid transfer protein {ECO:0000313|EMBL:AES59034.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00445 | 83882 | 84347 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000445s00020007.1 | PF14547.1 | Hydrophob_seed | 64 | 147 | 1.50E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3868.344 |
| SRR1783600 | control | 3727.323 |
| SRR1783602 | moderate drought stress | 1758.864 |
| SRR1811619 | moderate drought stress | 1746.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 206.615 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 202.583 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2439.314 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2378.846 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 272.288 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 263.458 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.339 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.551 |
| SRR2868004 | Drought Stress (root) | 20.842 |
| SRR2967015 | Control (root) | 141.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.537 |
| SRR9715740 | Leaf | 0.436 |
| SRR9715741 | Leaf | 0.813 |
| SRR9715739 | Root | 869.673 |
| SRR9715742 | Root | 359.258 |
| SRR9715743 | Root | 440.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.751 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.189 |
| SRR8749030 | Uninduced | 0.119 |
| SRR8749031 | Uninduced | 0.070 |
| SRR8749032 | Uninduced | 0.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1659.677 |
| SRR8400027 | Control - Root | 1844.584 |