Gene detail information of Glyur000444s00022238 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | ATMG01190.1 | 9.00E-06 | ATP synthase subunit 1 |
| NR | XP_004512814.1 | 1.26E-26 | PREDICTED: uncharacterized protein LOC101489699 [Cicer arietinum] |
| Swissprot | tr|P05493|ATPAM_PEA | 3.00E-07 | ATP synthase subunit alpha, mitochondrial |
| trEMBL | tr|A0A072VH87|A0A072VH87_MEDTR | 5.00E-26 | Uncharacterized protein {ECO:0000313|EMBL:KEH37515.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00444 | 115914 | 116363 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.389 |
| SRR1783600 | control | 9.109 |
| SRR1783602 | moderate drought stress | 4.794 |
| SRR1811619 | moderate drought stress | 5.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.915 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.214 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.623 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.968 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.537 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.533 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.455 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.935 |
| SRR2868004 | Drought Stress (root) | 0.822 |
| SRR2967015 | Control (root) | 0.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.148 |
| SRR9715740 | Leaf | 0.422 |
| SRR9715741 | Leaf | 1.357 |
| SRR9715739 | Root | 3.514 |
| SRR9715742 | Root | 3.462 |
| SRR9715743 | Root | 2.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.986 |
| SRR8749028 | MeJA induced 9h | 0.208 |
| SRR8749029 | MeJA induced 9h | 0.193 |
| SRR8749030 | Uninduced | 0.799 |
| SRR8749031 | Uninduced | 0.341 |
| SRR8749032 | Uninduced | 0.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.031 |
| SRR8400027 | Control - Root | 0.233 |