Gene detail

Gene detail information of Glyur000444s00022226.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT4G00730.1	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
NR	XP_006589557.1	PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X2 [Glycine max]
Swissprot	tr\|Q0WV12\|ANL2_ARATH	Homeobox-leucine zipper protein ANTHOCYANINLESS 2
trEMBL	tr\|K7LL44\|K7LL44_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G38280.2}

Sequence

Transcript Sequence

>Glyur000444s00022226.1
ATGGAGGGGCATAGTGAGATGGGTCTCACAGGGGAAAGTTTAGATACTGGTATTATAGGGAGAATGAGGGACGATGAGTATGAAAGCCGTTCTGGAAGTGATAACTTTGAAGGCGTATCTGGTGATGATCTGGATGCTGGTGATGATCACCCCCAGAGGAAGAAGAGATACCATAGACACACTCCTCATCAAATTCAAGAGCTTGAGGCTTTCTTCAAGGAGTGCCCTCATCCTGATGAGAAGCAAAGGTTGGATCTTAGTAAGAGGCTTGGCTTGGAGAATAAGCAAGTCAAATTCTGGTTTCAGAATCGAAGGACCCAAATGAAGACTCAGCTGGAACGCCATGAGAACATAATGCTGAGGCAGGAAAATGACAAGCTCAGAGCGGAGAATGGTTTGATGAAGGAAGCCATGGCAAATCCAGTATGTAACAGCTGTGGTGGCCCTGCCATTCCTGGCCAGATTTCATTCGAGGAGCACCAGATTAGAATCGAAAATGCTCGCCTAAAGGATGAATTGAACCGTATAAGTGCCTTGGCAAACAAGTTCCTTGGCAAACCAATCTCATCATTGGCATCTCCCATGGCTCTCCCAACATCAAATTCTGGCCTAGAACTTGGTATTGGAAGGAATGGCTTTGGTGGTTCAAGCTCTCTTTTTACTTCCTTGCCAATGGGACTTGATCTGGGAGATGGAGTCTTGGGCACCCAACCTGCAATGTCTGGTATTAGGTCACCAATGGGATTGATGGGAAATGAAGTCCAACTTGATAGATCAGTGCTTATAGATCTTGCATTTGCTGCCATGGAGGAATTGGTAAAGATAGCTCAGGCAGATAGCCCTCTTTGGATTAAGAGTTTGGATGGTGAGAGGGAAATATTGAACCTTGAGGAGTATGCAAGGATGTTTTCTCCCTGCACCAGTCCAAAACCCACTGCTTATGTAACTGAAGCTACAAGAGAAACTGGGATAGTGATAATCAACAGTTTAGCCCTTGTGGAAACTTTGATGGACGCGAATCGATGGGCGGAGATGTTTCCGTCAATGATTGCTAGAGCTGTGAACCTTGATGTTATATCTGGTGGCATGGGTGGAACAAGAAATGGTGCTATACAAGTGATGCATGCTGAGGTTCAGTTGCTTTCACCTCTAGTCCCTGTTCGTCAAGTGAGGTTCCTCCGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCTGTGGTTGATGTTTCTGTTGAGATTGGTCATGATGCTGCTAATGGACATCCATTCATGAGCTGTAGGAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCCAATGGTTACTCCAAGGTGACATGGCTTGAGCATTGGGAGTATGATGAGAGTGTTGTCCACCAACTTTATCGCCCATTGCTGAATTCTGGTTTTGGATTTGGTGCTCATAGATGGATCGCCACCCTCCAAAGGCAGTGTGAATGCTTGGCCATCCTCATGTCCTCTTCCATCTCAAGTGATGATCACACGGCCTTGAGCCAAGCCGGTAGGAGGAGCATGTTGAAACTGGCACAACGCATGACCAGTAACTTCTGTACCGGGGTTTGTGCTTCATCGGCTCGCAAGTGGGACAGCCTTCACACGGGGACCCTCAGTGATGACATGAGGGTGATGACCAGAAAGAATGTGGATGACCCCGGCGAGCCTCCCGGGATCGTGCTCAGCGCCGCAACCTCTGTTTGGATGCCAGTGTCGCGGCAAAGACTGTTTGATTTTCTGCGTGATGAGCAGCTGAGAAGCGAGTGGGACATTTTGTCCAATGGTGGACCAATGCAGGAGATGGTTCACATTGCCAAAGGACAAGGACAAGGAAATTGCGCTGTTAATGCGAATGATAGCAGCATGCTGATTCTGCAAGAGACATGGATGGATTCCTCGTGCTCCGTCGTGGTGTATGCACCGGTGGACGTGCAATCCTTGAACGTGGTGATGAGCGGGGGAGATTCTGCCTACGTTGCACTCTTGCCTTCAGGCTTTGCCATTCTTCCCGACGGCAATGTCGGATCGAACAACGGTTGCAACGGGACTTTACAGAAGGGAGGTGGCATCGGTGACGGTGGTGGAACCGGAAGCTTGCTCACAGTTGGGTTCCAAATTCTGGTGAATAGTCTCCCAACTGCTAAGCTCACTATGGAGTCAGTTGATACTGTGAATAACCTCATCTCATGCACCATTCAGAAGATCAAGGCTGCCCTCAGAGTTGCATAACAAAAAGCCCATTTTGTTAATGCAATCACCAAGTTATATTATACACCTTATATATTTTGTCAACTGCCTTTAATATATTTTTTTATTTTGTTTTCTAAAATGAATTGAGAAAGGGGGGGGGGGGGTTATAAATTTGGTTGTATAGGATTTATATTATATTATATAGAGTATTAGTGGAAGAGGCTGAGACAGAAAGGGTCGCGTAAGGAAGGTTTCGAGTCAAGAACGAACCGCGAAAAAGGAACTTGTGCAGTCGCGAGTGCAAGTTTTCAACTCATGCTGGTTCGGGTATTGACTCGTTCACCTGCGAGTTAGTCTCGTTATTCTTACTTGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00444	23364	27875	-

Gene family

Gene family	subfamily
Transcription Factors Family	HB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003677 DNA binding

GO:0008289 lipid binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000444s00022226.1	PF00046.24	Homeobox	54	109	4.00E-19
Glyur000444s00022226.1	PF01852.14	START	264	487	3.00E-53

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.015
SRR1811619	moderate drought stress	0.016

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.083
DRR006520	Root Summer glycyrrhizin high producing strain	0.083
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.085
DRR006524	Root Summer glycyrrhizin low producing strain	0.128
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.140
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.893

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.120
SRR2868004	Drought Stress (root)	0.989
SRR2967015	Control (root)	1.481

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.379
SRR9715740	Leaf	3.653
SRR9715741	Leaf	2.028
SRR9715739	Root	0.000
SRR9715742	Root	0.474
SRR9715743	Root	0.342

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.399
SRR8749028	MeJA induced 9h	0.128
SRR8749029	MeJA induced 9h	0.334
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.010

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.225
SRR8400027	Control - Root	0.732