Gene detail information of Glyur000443s00016862 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43235.1 | 3.00E-90 | |
| NR | KEH44546.1 | 0 | hypothetical protein MTR_1g116540 [Medicago truncatula] |
| trEMBL | tr|A0A072VS83|A0A072VS83_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH44546.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00443 | 126418 | 130368 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.391 |
| SRR1783600 | control | 8.249 |
| SRR1783602 | moderate drought stress | 16.259 |
| SRR1811619 | moderate drought stress | 16.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.421 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.933 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.065 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.021 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.029 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.402 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 44.608 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 44.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.573 |
| SRR2868004 | Drought Stress (root) | 20.915 |
| SRR2967015 | Control (root) | 22.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 45.730 |
| SRR9715740 | Leaf | 62.439 |
| SRR9715741 | Leaf | 42.009 |
| SRR9715739 | Root | 7.517 |
| SRR9715742 | Root | 10.325 |
| SRR9715743 | Root | 11.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.750 |
| SRR8749028 | MeJA induced 9h | 12.817 |
| SRR8749029 | MeJA induced 9h | 6.829 |
| SRR8749030 | Uninduced | 7.320 |
| SRR8749031 | Uninduced | 4.036 |
| SRR8749032 | Uninduced | 6.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.920 |
| SRR8400027 | Control - Root | 17.273 |