Gene detail information of Glyur000441s00028797 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003613114.1 | 1.75E-09 | hypothetical protein MTR_5g032920 [Medicago truncatula] |
| trEMBL | tr|G7JYW2|G7JYW2_MEDTR | 7.00E-10 | PIF1 DNA helicase/replication A1-like protein, putative {ECO:0000313|EMBL:AES96072.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00441 | 158466 | 164643 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.827 |
| SRR1783600 | control | 5.662 |
| SRR1783602 | moderate drought stress | 8.330 |
| SRR1811619 | moderate drought stress | 9.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.424 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.554 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.961 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.823 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.310 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.686 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.277 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.691 |
| SRR2868004 | Drought Stress (root) | 22.313 |
| SRR2967015 | Control (root) | 21.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 2.642 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.416 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.327 |
| SRR8749028 | MeJA induced 9h | 12.149 |
| SRR8749029 | MeJA induced 9h | 5.134 |
| SRR8749030 | Uninduced | 8.516 |
| SRR8749031 | Uninduced | 4.058 |
| SRR8749032 | Uninduced | 3.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.211 |
| SRR8400027 | Control - Root | 15.855 |