Gene detail information of Glyur000441s00028789 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G40087.1 | 5.00E-04 | Plant transposase (Ptta/En/Spm family) |
| NR | BAG12304.1 | 4.85E-15 | 6b-interacting protein 2 [Nicotiana tabacum] |
| trEMBL | tr|B1B5X5|B1B5X5_TOBAC | 2.00E-15 | 6b-interacting protein 2 {ECO:0000313|EMBL:BAG12304.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00441 | 73920 | 75680 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.071 |
| SRR1783600 | control | 2.349 |
| SRR1783602 | moderate drought stress | 4.942 |
| SRR1811619 | moderate drought stress | 5.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.599 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.367 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.380 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.620 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.253 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.460 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.027 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.240 |
| SRR2868004 | Drought Stress (root) | 6.247 |
| SRR2967015 | Control (root) | 6.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.487 |
| SRR9715740 | Leaf | 1.882 |
| SRR9715741 | Leaf | 2.386 |
| SRR9715739 | Root | 0.145 |
| SRR9715742 | Root | 2.463 |
| SRR9715743 | Root | 1.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.085 |
| SRR8749028 | MeJA induced 9h | 7.914 |
| SRR8749029 | MeJA induced 9h | 3.252 |
| SRR8749030 | Uninduced | 11.255 |
| SRR8749031 | Uninduced | 4.386 |
| SRR8749032 | Uninduced | 3.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.471 |
| SRR8400027 | Control - Root | 5.664 |