Gene detail information of Glyur000440s00021873 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40390.1 | 8.00E-144 | |
| NR | XP_003518418.1 | 0 | PREDICTED: uncharacterized protein LOC100782905 [Glycine max] |
| trEMBL | tr|I1JIC7|I1JIC7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G42880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00440 | 128800 | 130876 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.628 |
| SRR1783600 | control | 0.649 |
| SRR1783602 | moderate drought stress | 0.799 |
| SRR1811619 | moderate drought stress | 0.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.362 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.346 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.320 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.204 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.050 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.004 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.124 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.960 |
| SRR2868004 | Drought Stress (root) | 4.500 |
| SRR2967015 | Control (root) | 2.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.996 |
| SRR9715740 | Leaf | 0.331 |
| SRR9715741 | Leaf | 0.462 |
| SRR9715739 | Root | 0.135 |
| SRR9715742 | Root | 2.036 |
| SRR9715743 | Root | 1.974 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.024 |
| SRR8749028 | MeJA induced 9h | 0.209 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.212 |
| SRR8749031 | Uninduced | 0.045 |
| SRR8749032 | Uninduced | 0.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.471 |
| SRR8400027 | Control - Root | 1.252 |