Gene detail information of Glyur000440s00021860 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40320.1 | 2.00E-159 | TRICHOME BIREFRINGENCE-LIKE 33 |
| NR | XP_004491007.1 | 0 | PREDICTED: uncharacterized protein LOC101508931 [Cicer arietinum] |
| Swissprot | tr|F4IH21|TBL33_ARATH | 0 | Protein trichome birefringence-like 33 |
| trEMBL | tr|V7BB97|V7BB97_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW13726.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00440 | 58673 | 62932 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000440s00021860.1 | PF13839.1 | PC-Esterase | 32 | 320 | 1.10E-82 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 38.990 |
| SRR1783600 | control | 39.499 |
| SRR1783602 | moderate drought stress | 25.379 |
| SRR1811619 | moderate drought stress | 24.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.679 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.266 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.059 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.057 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.115 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.264 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.411 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 139.789 |
| SRR2868004 | Drought Stress (root) | 125.806 |
| SRR2967015 | Control (root) | 141.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.227 |
| SRR9715740 | Leaf | 11.061 |
| SRR9715741 | Leaf | 5.999 |
| SRR9715739 | Root | 27.276 |
| SRR9715742 | Root | 32.042 |
| SRR9715743 | Root | 28.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.033 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 127.083 |
| SRR8400027 | Control - Root | 125.380 |