Gene detail information of Glyur000440s00021857 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G35250.1 | 2.00E-22 | Protein of Unknown Function (DUF239) |
| NR | KEH37729.1 | 1.52E-87 | carboxyl-terminal peptidase [Medicago truncatula] |
| trEMBL | tr|A0A072V6N4|A0A072V6N4_MEDTR | 6.00E-88 | Carboxyl-terminal peptidase {ECO:0000313|EMBL:KEH37729.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00440 | 23090 | 29738 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000440s00021857.1 | PF14365.1 | DUF4409 | 50 | 114 | 8.00E-11 |
| Glyur000440s00021857.1 | PF03080.10 | DUF239 | 129 | 281 | 1.10E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.623 |
| SRR1783600 | control | 0.528 |
| SRR1783602 | moderate drought stress | 0.849 |
| SRR1811619 | moderate drought stress | 0.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.102 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.274 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.085 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.338 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.706 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.684 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.107 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.520 |
| SRR2868004 | Drought Stress (root) | 6.575 |
| SRR2967015 | Control (root) | 11.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.073 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.072 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.695 |
| SRR8749028 | MeJA induced 9h | 0.446 |
| SRR8749029 | MeJA induced 9h | 0.572 |
| SRR8749030 | Uninduced | 1.275 |
| SRR8749031 | Uninduced | 1.415 |
| SRR8749032 | Uninduced | 4.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.119 |
| SRR8400027 | Control - Root | 0.198 |