Gene detail information of Glyur000440s00021856.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G11050.11.00E-34ferritin 2
NRXP_004491012.19.45E-55PREDICTED: ferritin-2, chloroplastic-like isoform X2 [Cicer arietinum]
Swissprottr|Q41709|FRI2_VIGUN7.00E-51Ferritin-2, chloroplastic (Precursor)
trEMBLtr|A0A072UGM5|A0A072UGM5_MEDTR1.00E-50Ferritin {ECO:0000256|RuleBase:RU361145}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold004401295513552-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K00522FTH1EC:1.16.3.2Mineral absorptionmap04978


Gene Ontology

biological_process

GO:0006826  iron ion transport

GO:0006879  cellular iron ion homeostasis


molecular_function

GO:0008199  ferric iron binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000440s00021856.1PF00210.19Ferritin1291645.80E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control210.983
SRR1783600control214.669
SRR1783602moderate drought stress187.635
SRR1811619moderate drought stress181.073

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain226.597
DRR006520Root Summer glycyrrhizin high producing strain226.205
DRR006521Root Winter glycyrrhizin high producing strain203.651
DRR006522Root Winter glycyrrhizin high producing strain190.925
DRR006523Root Summer glycyrrhizin low producing strain141.947
DRR006524Root Summer glycyrrhizin low producing strain143.360
DRR006525Leaf Summer glycyrrhizin high producing strain81.819
DRR006526Leaf Summer glycyrrhizin high producing strain82.358

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)15.919
SRR2868004Drought Stress (root)3.382
SRR2967015Control (root)22.881

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf2.324
SRR9715740Leaf6.337
SRR9715741Leaf1.855
SRR9715739Root6.192
SRR9715742Root3.963
SRR9715743Root3.853

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.497
SRR8749028MeJA induced 9h2.442
SRR8749029MeJA induced 9h2.951
SRR8749030Uninduced0.770
SRR8749031Uninduced0.343
SRR8749032Uninduced22.435

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root19.627
SRR8400027Control - Root15.501

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved