Gene detail information of Glyur000440s00021855.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11050.1 | 6.00E-06 | ferritin 2 |
| NR | XP_003616685.1 | 3.33E-15 | Ferritin-2 [Medicago truncatula] |
| Swissprot | tr|Q948P5|FRI4_SOYBN | 1.00E-16 | Ferritin-4, chloroplastic (Precursor) |
| trEMBL | tr|G7K283|G7K283_MEDTR | 1.00E-15 | Ferritin {ECO:0000256|RuleBase:RU361145} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00440 | 10758 | 11750 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00522 | FTH1 | EC:1.16.3.2 | Mineral absorption | map04978 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 88.364 |
| SRR1783600 | control | 91.548 |
| SRR1783602 | moderate drought stress | 35.546 |
| SRR1811619 | moderate drought stress | 36.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 59.106 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 65.668 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 52.250 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 62.297 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.970 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 37.852 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.877 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 86.264 |
| SRR2868004 | Drought Stress (root) | 48.098 |
| SRR2967015 | Control (root) | 108.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.320 |
| SRR9715740 | Leaf | 78.518 |
| SRR9715741 | Leaf | 32.553 |
| SRR9715739 | Root | 37.366 |
| SRR9715742 | Root | 52.079 |
| SRR9715743 | Root | 49.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.648 |
| SRR8749028 | MeJA induced 9h | 6.232 |
| SRR8749029 | MeJA induced 9h | 18.348 |
| SRR8749030 | Uninduced | 7.825 |
| SRR8749031 | Uninduced | 8.485 |
| SRR8749032 | Uninduced | 15.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 89.797 |
| SRR8400027 | Control - Root | 173.509 |