Gene detail information of Glyur000439s00019015 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48580.1 | 4.00E-58 | FK506- and rapamycin-binding protein 15 kD-2 |
| NR | XP_004510237.1 | 1.27E-92 | PREDICTED: FK506-binding protein 2-like [Cicer arietinum] |
| COG | YP_315910.1 | 5.00E-30 | peptidyl-prolyl cis-trans isomerase [Thiobacillus denitrificans ATCC 25259] |
| Swissprot | tr|Q41649|FKB15_VICFA | 2.00E-84 | FK506-binding protein 2 (Precursor) |
| trEMBL | tr|I3SJ25|I3SJ25_LOTJA | 1.00E-92 | Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00439 | 113878 | 117574 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000439s00019015.1 | PF00254.23 | FKBP_C | 41 | 132 | 3.20E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 186.266 |
| SRR1783600 | control | 187.173 |
| SRR1783602 | moderate drought stress | 121.031 |
| SRR1811619 | moderate drought stress | 120.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 153.175 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 151.244 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 98.540 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 95.398 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 131.523 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 131.635 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 94.254 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 94.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 289.793 |
| SRR2868004 | Drought Stress (root) | 158.554 |
| SRR2967015 | Control (root) | 135.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 73.487 |
| SRR9715740 | Leaf | 51.449 |
| SRR9715741 | Leaf | 56.411 |
| SRR9715739 | Root | 17.913 |
| SRR9715742 | Root | 41.968 |
| SRR9715743 | Root | 41.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 137.760 |
| SRR8749028 | MeJA induced 9h | 82.666 |
| SRR8749029 | MeJA induced 9h | 92.834 |
| SRR8749030 | Uninduced | 31.254 |
| SRR8749031 | Uninduced | 11.362 |
| SRR8749032 | Uninduced | 18.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 170.662 |
| SRR8400027 | Control - Root | 171.630 |