Gene detail information of Glyur000439s00019000 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07350.1 | 3.00E-57 | Protein of unknown function (DUF506) |
| NR | XP_003626934.1 | 2.19E-172 | hypothetical protein MTR_8g012240 [Medicago truncatula] |
| trEMBL | tr|G7LF52|G7LF52_MEDTR | 8.00E-173 | DUF506 family protein {ECO:0000313|EMBL:AET01410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00439 | 24174 | 25085 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000439s00019000.1 | PF04720.7 | DUF506 | 48 | 259 | 1.40E-63 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.492 |
| SRR1783600 | control | 16.575 |
| SRR1783602 | moderate drought stress | 47.637 |
| SRR1811619 | moderate drought stress | 54.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 40.580 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 41.327 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.843 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.536 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.144 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.312 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.418 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.988 |
| SRR2868004 | Drought Stress (root) | 7.370 |
| SRR2967015 | Control (root) | 5.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.943 |
| SRR9715740 | Leaf | 13.089 |
| SRR9715741 | Leaf | 8.580 |
| SRR9715739 | Root | 41.344 |
| SRR9715742 | Root | 28.007 |
| SRR9715743 | Root | 27.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.454 |
| SRR8749028 | MeJA induced 9h | 6.589 |
| SRR8749029 | MeJA induced 9h | 1.750 |
| SRR8749030 | Uninduced | 1.057 |
| SRR8749031 | Uninduced | 0.950 |
| SRR8749032 | Uninduced | 2.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.077 |
| SRR8400027 | Control - Root | 1.932 |