Gene detail information of Glyur000437s00025669 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15385.1 | 4.00E-06 | |
| NR | KEH28698.1 | 1.45E-26 | DUF761 domain protein [Medicago truncatula] |
| trEMBL | tr|A0A072UHU7|A0A072UHU7_MEDTR | 5.00E-27 | DUF761 domain protein {ECO:0000313|EMBL:KEH28698.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00437 | 162997 | 163314 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000437s00025669.1 | PF05553.6 | DUF761 | 68 | 104 | 3.20E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.116 |
| SRR1783600 | control | 1.085 |
| SRR1783602 | moderate drought stress | 1.754 |
| SRR1811619 | moderate drought stress | 1.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.594 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.696 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.580 |
| SRR2868004 | Drought Stress (root) | 54.828 |
| SRR2967015 | Control (root) | 36.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.636 |
| SRR9715740 | Leaf | 0.237 |
| SRR9715741 | Leaf | 1.750 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.097 |
| SRR9715743 | Root | 0.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 321.096 |
| SRR8749028 | MeJA induced 9h | 864.024 |
| SRR8749029 | MeJA induced 9h | 785.199 |
| SRR8749030 | Uninduced | 2880.815 |
| SRR8749031 | Uninduced | 3721.893 |
| SRR8749032 | Uninduced | 3206.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.715 |
| SRR8400027 | Control - Root | 2.977 |