Gene detail information of Glyur000437s00025666 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80180.1 | 4.00E-12 | |
| NR | XP_004506906.1 | 1.20E-44 | PREDICTED: uncharacterized protein At1g15400-like [Cicer arietinum] |
| Swissprot | tr|Q9XI29|Y1540_ARATH | 2.00E-29 | Uncharacterized protein At1g15400 |
| trEMBL | tr|B9GWC8|B9GWC8_POPTR | 4.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:EEE79127.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00437 | 124391 | 124774 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 78.201 |
| SRR1783600 | control | 76.280 |
| SRR1783602 | moderate drought stress | 137.919 |
| SRR1811619 | moderate drought stress | 138.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 100.321 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 95.776 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 108.446 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 102.195 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 84.597 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 88.730 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.452 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 117.374 |
| SRR2868004 | Drought Stress (root) | 151.182 |
| SRR2967015 | Control (root) | 156.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.580 |
| SRR9715740 | Leaf | 37.964 |
| SRR9715741 | Leaf | 51.966 |
| SRR9715739 | Root | 42.036 |
| SRR9715742 | Root | 41.700 |
| SRR9715743 | Root | 39.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 65.696 |
| SRR8749028 | MeJA induced 9h | 242.219 |
| SRR8749029 | MeJA induced 9h | 170.915 |
| SRR8749030 | Uninduced | 290.839 |
| SRR8749031 | Uninduced | 402.543 |
| SRR8749032 | Uninduced | 443.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 116.958 |
| SRR8400027 | Control - Root | 101.076 |