Gene detail information of Glyur000437s00025664 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11280.1 | 5.00E-06 | |
| NR | KHN01345.1 | 3.81E-44 | hypothetical protein glysoja_009551 [Glycine soja] |
| trEMBL | tr|K7KZE8|K7KZE8_SOYBN | 2.00E-44 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G03600.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00437 | 110474 | 112199 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.507 |
| SRR1783600 | control | 1.510 |
| SRR1783602 | moderate drought stress | 0.868 |
| SRR1811619 | moderate drought stress | 1.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.331 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.916 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.414 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.493 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.073 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.366 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.776 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.474 |
| SRR2868004 | Drought Stress (root) | 0.160 |
| SRR2967015 | Control (root) | 0.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.318 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.266 |
| SRR9715742 | Root | 0.861 |
| SRR9715743 | Root | 0.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.043 |
| SRR8749028 | MeJA induced 9h | 9.735 |
| SRR8749029 | MeJA induced 9h | 5.670 |
| SRR8749030 | Uninduced | 3.582 |
| SRR8749031 | Uninduced | 6.310 |
| SRR8749032 | Uninduced | 7.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.836 |
| SRR8400027 | Control - Root | 1.294 |