Gene detail information of Glyur000437s00025657 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15670.1 | 8.00E-24 | Late embryogenesis abundant protein (LEA) family protein |
| NR | KEH28711.1 | 1.06E-69 | late embryogenesis abundant protein group 3 protein [Medicago truncatula] |
| Swissprot | tr|O49816|LEA1_CICAR | 5.00E-70 | Late embryogenesis abundant protein 1 |
| trEMBL | tr|A0A072UH01|A0A072UH01_MEDTR | 4.00E-70 | Late embryogenesis abundant protein group 3 protein {ECO:0000313|EMBL:KEH28711.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00437 | 79935 | 81382 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.310 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.309 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 43.521 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 42.314 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.338 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.332 |
| SRR2868004 | Drought Stress (root) | 0.150 |
| SRR2967015 | Control (root) | 0.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.133 |
| SRR9715740 | Leaf | 0.749 |
| SRR9715741 | Leaf | 0.694 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.102 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.109 |
| SRR8749032 | Uninduced | 0.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.725 |
| SRR8400027 | Control - Root | 0.439 |