Gene detail information of Glyur000437s00025654 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15660.2 | 9.00E-24 | glutaredoxin 4 |
| NR | NP_001236843.1 | 2.88E-33 | uncharacterized protein LOC100500103 [Glycine max] |
| COG | YP_001602207.1 | 4.00E-15 | monothiol glutaredoxin [Gluconacetobacter diazotrophicus PAl 5] |
| Swissprot | tr|Q8LBK6|GRS15_ARATH | 2.00E-29 | Monothiol glutaredoxin-S15, mitochondrial (Precursor) |
| trEMBL | tr|C6T0A5|C6T0A5_SOYBN | 1.00E-33 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU14928.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00437 | 66531 | 67974 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000437s00025654.1 | PF00462.19 | Glutaredoxin | 28 | 75 | 5.60E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.368 |
| SRR1783600 | control | 6.746 |
| SRR1783602 | moderate drought stress | 4.629 |
| SRR1811619 | moderate drought stress | 5.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.334 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.361 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.789 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.758 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.121 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.538 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.349 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.549 |
| SRR2868004 | Drought Stress (root) | 10.645 |
| SRR2967015 | Control (root) | 10.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.533 |
| SRR9715740 | Leaf | 27.729 |
| SRR9715741 | Leaf | 26.612 |
| SRR9715739 | Root | 6.356 |
| SRR9715742 | Root | 10.183 |
| SRR9715743 | Root | 10.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.643 |
| SRR8749028 | MeJA induced 9h | 8.415 |
| SRR8749029 | MeJA induced 9h | 10.385 |
| SRR8749030 | Uninduced | 6.142 |
| SRR8749031 | Uninduced | 3.112 |
| SRR8749032 | Uninduced | 4.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.915 |
| SRR8400027 | Control - Root | 31.099 |