Gene detail information of Glyur000437s00025648 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15630.1 | 3.00E-27 | |
| NR | XP_003531697.1 | 8.69E-46 | PREDICTED: uncharacterized protein LOC100778751 [Glycine max] |
| trEMBL | tr|I1KVB0|I1KVB0_SOYBN | 3.00E-46 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G22370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00437 | 22604 | 22933 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.740 |
| SRR1783600 | control | 6.919 |
| SRR1783602 | moderate drought stress | 6.033 |
| SRR1811619 | moderate drought stress | 6.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.303 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.872 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 45.887 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 41.359 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 194.943 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 192.236 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.306 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.110 |
| SRR2868004 | Drought Stress (root) | 78.610 |
| SRR2967015 | Control (root) | 204.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 58.496 |
| SRR9715740 | Leaf | 15.922 |
| SRR9715741 | Leaf | 52.813 |
| SRR9715739 | Root | 29.285 |
| SRR9715742 | Root | 33.218 |
| SRR9715743 | Root | 33.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 206.288 |
| SRR8749028 | MeJA induced 9h | 218.131 |
| SRR8749029 | MeJA induced 9h | 227.535 |
| SRR8749030 | Uninduced | 274.553 |
| SRR8749031 | Uninduced | 325.420 |
| SRR8749032 | Uninduced | 540.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 73.829 |
| SRR8400027 | Control - Root | 88.584 |