Gene detail information of Glyur000436s00018469 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63300.1 | 0 | Myosin heavy chain-related protein |
| NR | XP_004503761.1 | 0 | PREDICTED: myosin-11-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1K6K8|I1K6K8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G37980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00436 | 158264 | 163872 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000436s00018469.1 | PF10358.4 | NT-C2 | 8 | 142 | 4.90E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.735 |
| SRR1783600 | control | 22.908 |
| SRR1783602 | moderate drought stress | 24.056 |
| SRR1811619 | moderate drought stress | 23.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.603 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.441 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.382 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.370 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.025 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.143 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.608 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.633 |
| SRR2868004 | Drought Stress (root) | 21.932 |
| SRR2967015 | Control (root) | 25.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.681 |
| SRR9715740 | Leaf | 4.009 |
| SRR9715741 | Leaf | 3.858 |
| SRR9715739 | Root | 2.331 |
| SRR9715742 | Root | 7.392 |
| SRR9715743 | Root | 5.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.948 |
| SRR8749028 | MeJA induced 9h | 6.547 |
| SRR8749029 | MeJA induced 9h | 3.031 |
| SRR8749030 | Uninduced | 0.776 |
| SRR8749031 | Uninduced | 0.382 |
| SRR8749032 | Uninduced | 1.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.284 |
| SRR8400027 | Control - Root | 34.726 |