Gene detail information of Glyur000436s00018461 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32500.1 | 4.00E-61 | Stress responsive alpha-beta barrel domain protein |
| NR | XP_006580603.1 | 8.02E-132 | PREDICTED: uncharacterized protein LOC100801905 isoform X5 [Glycine max] |
| trEMBL | tr|I1K6L5|I1K6L5_SOYBN | 3.00E-130 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G38050.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00436 | 112973 | 115722 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000436s00018461.1 | PF07876.7 | Dabb | 65 | 159 | 6.10E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.555 |
| SRR1783600 | control | 0.667 |
| SRR1783602 | moderate drought stress | 0.318 |
| SRR1811619 | moderate drought stress | 0.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.215 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.215 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.322 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.327 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.317 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.375 |
| SRR2868004 | Drought Stress (root) | 1.898 |
| SRR2967015 | Control (root) | 1.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.850 |
| SRR9715740 | Leaf | 21.671 |
| SRR9715741 | Leaf | 14.790 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.379 |
| SRR9715743 | Root | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.183 |
| SRR8749028 | MeJA induced 9h | 4.130 |
| SRR8749029 | MeJA induced 9h | 4.787 |
| SRR8749030 | Uninduced | 4.968 |
| SRR8749031 | Uninduced | 2.278 |
| SRR8749032 | Uninduced | 1.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.881 |
| SRR8400027 | Control - Root | 1.622 |