Gene detail information of Glyur000435s00027247 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03420.1 | 2.00E-36 | |
| NR | KHN02011.1 | 2.77E-89 | hypothetical protein glysoja_034533 [Glycine soja] |
| trEMBL | tr|I1JEB3|I1JEB3_SOYBN | 1.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G12680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00435 | 66054 | 67551 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.062 |
| SRR1783600 | control | 3.087 |
| SRR1783602 | moderate drought stress | 8.157 |
| SRR1811619 | moderate drought stress | 8.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.031 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.870 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.186 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.161 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.318 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.015 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 117.321 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 116.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.889 |
| SRR2868004 | Drought Stress (root) | 12.697 |
| SRR2967015 | Control (root) | 10.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 80.572 |
| SRR9715740 | Leaf | 125.238 |
| SRR9715741 | Leaf | 81.299 |
| SRR9715739 | Root | 1.684 |
| SRR9715742 | Root | 5.901 |
| SRR9715743 | Root | 3.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.438 |
| SRR8749028 | MeJA induced 9h | 0.207 |
| SRR8749029 | MeJA induced 9h | 0.247 |
| SRR8749030 | Uninduced | 0.033 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.594 |
| SRR8400027 | Control - Root | 7.456 |