Gene detail information of Glyur000434s00017219.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42850.1 | 4.00E-07 | cytochrome P450, family 718 |
| NR | KEH17087.1 | 7.48E-52 | cytochrome P450 family 90 protein [Medicago truncatula] |
| COG | YP_007146467.1 | 9.00E-06 | cytochrome P450 [Cylindrospermum stagnale PCC 7417] |
| Swissprot | tr|B5BSX1|BAMO_GLYUR | 2.00E-09 | Beta-amyrin 11-oxidase |
| trEMBL | tr|A0A072TI41|A0A072TI41_MEDTR | 3.00E-52 | Cytochrome P450 family 90 protein {ECO:0000313|EMBL:KEH17087.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00434 | 60233 | 63467 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP718 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000434s00017219.1 | PF00067.17 | p450 | 74 | 122 | 3.80E-06 |
| Glyur000434s00017219.1 | PF00067.17 | p450 | 123 | 171 | 3.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.713 |
| SRR1783600 | control | 0.449 |
| SRR1783602 | moderate drought stress | 0.161 |
| SRR1811619 | moderate drought stress | 0.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.627 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.807 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.258 |
| SRR2868004 | Drought Stress (root) | 0.170 |
| SRR2967015 | Control (root) | 0.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.008 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.162 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.406 |
| SRR8749028 | MeJA induced 9h | 0.324 |
| SRR8749029 | MeJA induced 9h | 0.272 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.366 |
| SRR8400027 | Control - Root | 0.714 |