Gene detail

Gene detail information of Glyur000432s00027016

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06839.3	8.00E-151	bZIP transcription factor family protein
NR	XP_004497935.1	0	PREDICTED: transcription factor HBP-1b(c1)-like [Cicer arietinum]
Swissprot	tr\|O24160\|TGA21_TOBAC	2.00E-122	TGACG-sequence-specific DNA-binding protein TGA-2.1
trEMBL	tr\|K7LI97\|K7LI97_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G11985.1}

Sequence

Transcript Sequence

>Glyur000432s00027016.1
ATGGGGTTTTCTTTGGCTATTGAAGAAGAAGAAGAAGCAGAACAACAACAACAAGAAGAGCAAGAGACAACAAAGTTTTTAGGTTGCTCTTCTTCTATGATCATGGCTTCCAATAGTACTATGAAGAGCACCAACTCAACAACAGCTGAACCACTCCCACCACCACCTCATCACCATCATCACCATCTCCATCATAATCATCATCATCAACCACAACAACATCCACATCAAATTCAAGACCATCAAATTTCTTTTGGAATGATGCCATCTTCCTCATCATCCTCTATCGCTGGAAACTACTTAAGCAAAGATTCTGGTGCTTATGATTTGGGTGAATTGGATCAAGCCTTTTTTTTGTATCTTGATGGACAAGCAGATCACCCCTCCAGTGTTCAAGACCAAAGACCAGAGAACTCATCATCATCAGCAATGAGGCCACCACCAACTCTTAACATTTTCCCATCTCAGCCTATGCACGTAGCACCCCCATCCAATCCCAAGGCTAGCATGGAATTACCTTCTCCACAAACCAGTGGTTCCAAGCAGAGACCATCTGAACCGTCCGTGGAGCTGGCCAACCCACGAAATGAACCCGCCTCTGCACCTGCACCACCCAAAACTACTGTAAAGCGAGAGAACAATCGCAAGGGTACAGCTTCAAGTTCTGAACAAGAAGGACCCAAAACACCAGATCCTAAGACACTGAGGAGACTTGCTCAGAATAGAGAGGCAGCAAGGAAAAGCAGGCTTAGGAAAAAGGCGTATGTTCAGCAGCTAGAGTCAAGTAGGATTAAGCTTAATCAGCTGGAACAAGAGTTACAGCGTGCTAGATCAACTCAAGGCATATTAATGGGTGGTGGTGGAGGTGCACTTTTGGGAGGAGAACAAGGCATTCCTGTTGCTATGGGTAGCATTAGCTCAGAGGCGGCGATGTTTGACGTGGAATATGCGAGGTGGTTGGAGGAGCACCAGCGGATAGTGTGTGAGCTAAGAGCTGCAGTCCAAGAACACCTTCACGAGAATGAGCTTCGGATATATGTGGAGAATTGCTTGGCTCACTTTGATCAAGTGATGAACCTCAAGAGCATACTTGCCAAAACAGATGTGTTCCATCTTGTTTTTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATCGGTGGCTTCAGGCCATCTGAACTCATTAAGATTATTCTTAATCAAATTGAGCCTCTGTCGGAGCAACAAATACTTGGTATATGTGGGTTGCAACAATCTACACAAGAGGCAGAGGAGGCTCTTTCCCAAGGGCTTGATGCNCTCAACCACTCTCTCTCAGAAACCATAACTTCAGACTCTTTGAGTTGTCCTCCCAATATGGCTAACTACATGGGGCAAATGGCTGTGGCCATGAACAAACTCTCCACTCTTGAAGGTTTTGTCAGACAGGCAGATAATCTGAGGCATCAAACCATTCATCGTCTGCATCAGCTCTTAACAATACGTCAAGCTGCAAGGTGTTTGGTGGCCATAGCTGAGTACTTCCATCGTCTGCGAGCACTGAGTTCTCTGTGGTTGACACGCCCTCGCCAAGATTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00432	110604	118707	-

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006351 transcription, DNA-templated

GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000432s00027016.1	PF00170.16	bZIP_1	233	268	2.00E-08
Glyur000432s00027016.1	PF14144.1	DOG1	327	402	1.70E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.257
SRR1783600	control	3.366
SRR1783602	moderate drought stress	3.702
SRR1811619	moderate drought stress	3.638

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.075
DRR006522	Root Winter glycyrrhizin high producing strain	0.105
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	23.438
SRR2868004	Drought Stress (root)	36.945
SRR2967015	Control (root)	38.490

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.042
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.038
SRR9715739	Root	1.572
SRR9715742	Root	1.940
SRR9715743	Root	2.009

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.233
SRR8749028	MeJA induced 9h	18.470
SRR8749029	MeJA induced 9h	7.082
SRR8749030	Uninduced	20.604
SRR8749031	Uninduced	35.852
SRR8749032	Uninduced	9.954

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.360
SRR8400027	Control - Root	11.061