Gene detail

Gene detail information of Glyur000432s00027014

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06900.1	1.00E-133	cytochrome P450, family 93, subfamily D, polypeptide 1
NR	KEH16481.1	0	cytochrome P450 family protein [Medicago truncatula]
COG	NP_241445.1	1.00E-38	cytochrome P450 hydroxylase [Bacillus halodurans C-125]
Swissprot	tr\|Q42798\|C93A1_SOYBN	0	3,9-dihydroxypterocarpan 6A-monooxygenase
trEMBL	tr\|A0A072TH04\|A0A072TH04_MEDTR	0	Cytochrome P450 family protein {ECO:0000313\|EMBL:KEH16481.1}

Sequence

Transcript Sequence

>Glyur000432s00027014.1
ATTTCATTCTCTACAAGTCAGCTTCATAGGTTATATAACAACCCTCACATTTTACCAATTCTTCCACACANAAAAAATAATAATAATCAGGCATGGCTGAAATCCAAGACTTTATCCAACTTTTCCTAATTTGGCTACTCTCCACCATTGCAATTCGAGCCATACTAACCCGAAAACAGAACAACAAGGAGNGTCATAGCCAAAGCCACCCACCAAGCCCTCTAGCACTACCCATAATTGGACACCTTCACCTTATTTCTCAATTACCCCACCAAAGCTTCCACAACCTCTCAACTCGCTATGGACCCATCATGCAAATCTTCNTAGGCTCTGTCCCTTGTGTAGTAGCTTCCACCCCAGAAATCGCCAAGGAGTTCCTCAAAACCAATGAAGCATCCTTCTCCAACCGTTTCAGAAGTGCTGCGGTTCACTATTTATCGTATGGCTCAAAGGGGTTCTTGTTTGCGCCTTATGGAGAGTACTGGAAGTTCATGAAGAAGCTCTGTGTATCTGAGCTTCTCGGTGGAAGAACACTCGATCAGCTAAGTCCACTGAGGAAACAAGAGACTGTGAGGTTTCTGAGNCTTATGCAGAGTAAAGGAGAAGCTGGTGTTGCTATTGATGTTGGTGGGGAGCTATTGACACTTGCAAATAGTGTCATAACGAGGATGACTATGAGCAAAACGTGTTTTGAAAATGATGGTGATGTGGAAGATATTAGGAAGATGGTGAAGGACACTGCGGAGCTTGCTGGGAAGTTTAATGTGTCTGANTTTATTTGGTTCTGTAAGAATTTGGATCTGCAGGGGATGAACAAGAGGCTTAAGGAGATTCTTGATAGGTTTGATACCATGATGGAGAGGGTGATAAGGGAGCATGAAGTGGAAAGGAAGAGAAGGAAGGAAAGGGGTGAAGAAGGAGCTNATCAAGTTATGGACTTGCTTGATATTTTGTTGGAAATACAGGGTGATGAGAGAACTGAGATGAAACTGACCAGAGAGAATGTCAAGGCTTTCATCTTGGACATATTTATGGCAGGAACTGACACGTCAGCTATAACGATCGAATGGGCTCTTGCTGAGTTAATCAACCACCCGCATGTGATGGAGAAAGCAAGACAAGAAATCGATTCAGTAATAGGAAAGAATAGATTAATAGAAGAGTNAGATCTTCCCAACCTTCCTTACTTGCGAGCTATAGTTAAAGAAACATTAAGGCTTCACCCTGCAGCACCACTTCTAGGGAGAGAATCATCTGAAAGTTGCAATGTTTGCGGGTATGAAATTCCAGCGAAGACAGTTGTATTTGTTAATTTGTGGTCAATGGGTAGGGACCCAAACATGTGGGAGAACCCACTTGATTTCAGGCCAGAGAGGTTTATAATGGGTGAAGAGAGTGTTCAGTTAGATGTGAGGGGACAGAATTTCCAACTAATGCCATTTGGGACTGGAAGAAGGGCATGTCCTGGTGCCTCACTTGCACTTCAGATGGTTCCCACTAACCTTGCTGCTATGGTTCAGTGCTTTGAATGGAAGGTTGTTGATGATGGTGGAGATGGTAATAATGGGAAAGTTAGCATGGAAGAGAAACCAGGCATGACCCTTCCAAGGGCTCATCCTTTGACGTGTGTCCCTGTGCCTCGTTTTGATTGCATTCCTTCTTGTGTATAGGCCAAATGCAGTCGTATATATATATATAAGTGTTTATTGGAAAGTTTATCTAAATTTGCTATTCTTTGCTACTTTGTTTTAAAAAAAAAATTTATATTGTTAGGTAGTGGATAGTAGCACTGCATTGCAAAGAGAGTTGGGAGATATTGANAAGTTCTAATCTTATCCCGTTGGTGACTAGTGAGACAAAATGGGAAAAAAGTCATAGAATTATAAAAGAATATCCTTTGTTTTATTTGTTTCCGTTGAAAATGACAAGAAAGGAATGTGATTTAAATTCACTCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00432	84806	87575	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP93D1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000432s00027014.1	PF00067.17	p450	40	488	6.60E-106

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.557
SRR1783600	control	12.725
SRR1783602	moderate drought stress	15.205
SRR1811619	moderate drought stress	15.166

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.387
DRR006520	Root Summer glycyrrhizin high producing strain	0.384
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	1.832
DRR006524	Root Summer glycyrrhizin low producing strain	1.838
DRR006525	Leaf Summer glycyrrhizin high producing strain	27.671
DRR006526	Leaf Summer glycyrrhizin high producing strain	27.784

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	50.137
SRR2868004	Drought Stress (root)	47.976
SRR2967015	Control (root)	70.002

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.295
SRR9715740	Leaf	21.798
SRR9715741	Leaf	21.233
SRR9715739	Root	15.291
SRR9715742	Root	13.198
SRR9715743	Root	11.023

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.034
SRR8749029	MeJA induced 9h	0.031
SRR8749030	Uninduced	0.007
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	46.525
SRR8400027	Control - Root	31.242