Gene detail

Gene detail information of Glyur000432s00027010.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06900.1	1.00E-139	cytochrome P450, family 93, subfamily D, polypeptide 1
NR	XP_003537188.1	0	PREDICTED: cytochrome P450 93A3-like [Glycine max]
COG	YP_006808796.1	1.00E-32	cytochrome P450 [Nocardia brasiliensis ATCC 700358]
Swissprot	tr\|Q42798\|C93A1_SOYBN	4.00E-168	3,9-dihydroxypterocarpan 6A-monooxygenase
trEMBL	tr\|I1L9U8\|I1L9U8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G12100.1}

Sequence

Transcript Sequence

>Glyur000432s00027010.1
ATGGCTGATTTTGGTGACTATTTTGGGCTACTTCTCATTGTTCTATTCTCAATCCTCTTGTTCCGAGTGATCTTCACCAACAATAAAGCATGTCTTCCACCAAGCCCTCGTGCCTTACCCGTTCTGGGACACCTCTACCTTCTCACAAACCTCCCTCACCAAGCATTCCAAAAAATCTCATCCCGTTATGGCCCTNTGGTCTACCTCTTGTTTGGTTCCAAACACTGTGTTCTTGTCTCTTCCCCTGAAATGGCCAAACAATGCCTTAAAACCAATGAGTCCTGTTTCCTAAACAGACCCAAGAGAACCAACGTGGACTACATCACATACGGTTCCTCAGATTTTGTAATGGCACCCTATGGACCCTATTGGAGGTTCATGAAGAGGCTTTGCATGAATGAACTCCTTGGTGGTCGAATACTTCACCAGCACCTTCCCATTAGAGCTGAAGAGATTAAGCTTTTCTTGAAGGGTATGATGAAAAGGTCTGATTTTGGAGAGAGGGTGAATGTTGGGGAGGAACTTTCTTTGCTTTCGAATAACATCATCACAAGGATGGCTTTGAGAAGAAGGTGTAGTGATGTTGAAGGGGAAGGGCACCAATTGATTGAGCTTGTGAGGGAGATGACTGAGCTAGGTGGGAAGTTCAACTTGGGAGACATGTTGTGGTTTGTTAAGAGGCTTGATTTGCAAGGGTTTGGTAAGAGGTTGGAGAGTGTNAGGAGTAGGTATGATGCTATAATGGAGAGGATCATGAAGGAACATGAAGATGCAAGGATGGTGAAGAAGAAAAATAAGGATAGTTGTAATGGAGATGAAGCAGTGAGGGATTTACTTGATAACATGTTTGGTGCTGGAACTGAGACATCAGCATGTACAATAGAATGGGCTTTGGCTGAGCTAATAAACCATCCAGACATGATGGAAAGAGCAAGACAAGAGATTGATTCAGTGGTTGGTAAGAGCAGATTGGTGGAGGAATCAGATATTCCCAACCTTCCCTATGTTCAATCCATAGTGAAAGAAACAATGAGGCTTCACCCAACTGGGCCTCTAATAGTGAGGCAATCAACTGAGGATTGCAATGTTGATGGGTATCACATTCCAGCAAGGACTTCTGTGTTTGTTAATGTGTGGGCCATTGGTAGGGACCCAAAATACTGGGAAAGCCCACTTGAGTTTAAGCCAGAGAGGTTCCTCAATGAGGAGGGACAGAGCATGTTGGATCTGAAGGGGCAGAATTTTGAACTGTTGTCTTTTGGTGCTGGAAGGAGAAGTTGCCCTGGTGCTTCACTAGCCTTGCAGATTATTTATACAACACTGGCTGGTATGGTTCAGTGTTTTGAATGGAAGGTTGGTGAAGAAGGGAATAATAATGGAACCATTGACATGGAGGAGGGTCCTGGAATGGCACTTCCTAGGGCAAATCCCCTGATATGCACCCCTAAAATGGACAGTATTCAAGAATACACACCAATTTTACTTATTTTGCTAGCCTCCACAATATTGCTCCAAGCCATATTCACAAGAGCCCGGTCAAAGTTTCACCTCCCACCAGGTCCATTGGCCTTACCAGTTATTGGACACTTCCACTTGCTACTACAACCACCCCTTCACAGAGCCATTCACAAGATCTCAAACCGTTATGGACCCTTGATTCACCTACACCTTGGTTCCACTCCAGTGGTGTTTGTTTCCTCAGCTGAGATAGCCAAAGAGATCTTCAGAACCCATGAGGCTTCTTTCTGCAACCGACCCTCTAATGTTGCCATTAGCTATCTCACTTACAANGCATCTGATTTGGGTTTCGCTCCCTATGGAACCTACTGGAAGTTCATGAAGAAACTCTGCATTGTGGTAATGAGAATGGCAATAAGCAAGAGCTGTTTCAACAGGGATATTGATGAGGCTCACAAGGTGATAGAGAGGGTGAGAGAGTCTTCCATGTTGAGTGGAATGTTTAACCTTGCGGATTACTTTTGGTTTTGCAAAAAGTTGGATCTTCAGGGAATGGGGAAGAGGCTAAAGGAGGTTCATGACAGGCTTGACACCATGATGGAGAGTATCATTCAGGAGCATGAAGAGGCAAGAAGAGGTGAATCGGCCAGAAATAAGGATGCTGCAAAGGANGTGCTTGATGCTCTTTTGAGTATTTATGAAGATCAAAGCTCAGAGGTCAAAATAACCAGAGACAACATTAAAGCCTTCTTGGTGGATATGTTCACAGGTGGGACAGATACAACTGCTGTGACTCTAGAATGGTCATTGGCAGAACTAATTAACCACCCAACAGTGATGGAGAAAGCAAGGAAGGAAATTGACTCTGTGATTGGCAAGGACAGAACAGTAGTGGAATCAGACATAGCTGATCTTCCTTATCTCCAAGCCATAGTGAAGGAGACACTAAGGCTTCACCCTCCATCTCCATTTATATTGAGAGAATCAANTGAGGACTGCACCGTTGCTGGGTTTGATATCCCATCAAAAACTCAGGTCTTCACCAATGTGTGGGCCATTGGAAGGGATCCAAAGCATTGGGATAACCCTCTTGAGTTTAGGCCAGAAAGGTTTCTCAGAAGGGAGAATCAAGTTGAATTAAGAGGGCAACATTATCAGCTTTTGCCTTTTGGGAGTGGAAGAAGAAGGTGCCCTGGAACTTCACTAGCACTAAATGTTGCCCACACCACCCTTGCTGCTATGATTCAATGCTTTGAATGGAAGGGTGATCAAGATGGAGGAGGGGATGGTAGTGTTGACATGAAAGAGGGCATGGCTGAAATCCAAGACTTTATCCAACTTTTCCTAATTTGGCTACTCTCCACCATTGCAATTCGAGCCATACTAACCCGAAAACAGAACAACAACAAGGGTCATAGCCAAAGCCACCCACCAAGCCCTCAAGCACTACCCATAATTGGACACCTTCACCTCATTTCAAAGTTACCTCACCAAAGCTTCCACAACCTCTCAACTCGTTACGGACCCATAATGCAACTCTTCCTCGAAACCGCCAAAGAGTTCCTCAAAACCCACGAAGCATGCTTCTCCAACCGCGTCAAAGGTTCCGCGATTCACTACCTATCGTACGGATCAAAGGGCTTCTTGTTCGCTCCTTATGGAGAGTACTGGAAGTTCATGAAGAAACTCTGCATGTCTAAGCTTCTCGGTGGCAAAACCATTGAGGAACACCACATGTTGAGGAAACAAGAGACTTTGAGGTTTCTGAGGCATATGCAGAGTAAAGGGGAAGCCTTTGAGGCCGTTGATGTTGGTGGGGAGTTACTGACTCTTAGCAATAATGTTATAACGAGAATGGCTATGAGTAGAACGTGTTCTGAAAATGAGGGTGATGTGGAAGAGATCAAGAAGATGGTGATAGATACTGCGGAGCTCGTGGGGAAGTTTAATGTGTTGGATTTCTTTCGGTTTAGGAGTTTTGATTTGATGGGGAGGAATAAAAGGGTTAAAGATATTAGGGAGAGGTTTGATACCATGATGGAGAGGGGTGATAGAGGAGCATGTGAAGAGAAAAGAAAGGGGAACCGAAACATCAGCAATAACCATCGAATGGGCTCTGGCTGA

Protein Sequence

>Glyur000432s00027010.1
MADFGDYFGLLLIVLFSILLFRVIFTNNKACLPPSPRALPVLGHLYLLTNLPHQAFQKISSRYGPXVYLLFGSKHCVLVSSPEMAKQCLKTNESCFLNRPKRTNVDYITYGSSDFVMAPYGPYWRFMKRLCMNELLGGRILHQHLPIRAEEIKLFLKGMMKRSDFGERVNVGEELSLLSNNIITRMALRRRCSDVEGEGHQLIELVREMTELGGKFNLGDMLWFVKRLDLQGFGKRLESVRSRYDAIMERIMKEHEDARMVKKKNKDSCNGDEAVRDLLDNMFGAGTETSACTIEWALAELINHPDMMERARQEIDSVVGKSRLVEESDIPNLPYVQSIVKETMRLHPTGPLIVRQSTEDCNVDGYHIPARTSVFVNVWAIGRDPKYWESPLEFKPERFLNEEGQSMLDLKGQNFELLSFGAGRRSCPGASLALQIIYTTLAGMVQCFEWKVGEEGNNNGTIDMEEGPGMALPRANPLICTPKMDSIQEYTPILLILLASTILLQAIFTRARSKFHLPPGPLALPVIGHFHLLLQPPLHRAIHKISNRYGPLIHLHLGSTPVVFVSSAEIAKEIFRTHEASFCNRPSNVAISYLTYXASDLGFAPYGTYWKFMKKLCIVVMRMAISKSCFNRDIDEAHKVIERVRESSMLSGMFNLADYFWFCKKLDLQGMGKRLKEVHDRLDTMMESIIQEHEEARRGESARNKDAAKXVLDALLSIYEDQSSEVKITRDNIKAFLVDMFTGGTDTTAVTLEWSLAELINHPTVMEKARKEIDSVIGKDRTVVESDIADLPYLQAIVKETLRLHPPSPFILRESXEDCTVAGFDIPSKTQVFTNVWAIGRDPKHWDNPLEFRPERFLRRENQVELRGQHYQLLPFGSGRRRCPGTSLALNVAHTTLAAMIQCFEWKGDQDGGGDGSVDMKEGMAEIQDFIQLFLIWLLSTIAIRAILTRKQNNNKGHSQSHPPSPQALPIIGHLHLISKLPHQSFHNLSTRYGPIMQLFLETAKEFLKTHEACFSNRVKGSAIHYLSYGSKGFLFAPYGEYWKFMKKLCMSKLLGGKTIEEHHMLRKQETLRFLRHMQSKGEAFEAVDVGGELLTLSNNVITRMAMSRTCSENEGDVEEIKKMVIDTAELVGKFNVLDFFRFRSFDLMGRNKRVKDIRERFDTMMERGDRGACEEKRKGNRNISNNHRMGSG

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00432	58293	73817	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP93D1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000432s00027010.1	PF00067.17	p450	33	459	1.00E-91
Glyur000432s00027010.1	PF00067.17	p450	518	652	2.60E-13
Glyur000432s00027010.1	PF00067.17	p450	624	910	4.70E-78
Glyur000432s00027010.1	PF00067.17	p450	963	1167	2.20E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.003
SRR1783600	control	0.995
SRR1783602	moderate drought stress	0.843
SRR1811619	moderate drought stress	0.840

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.015
DRR006524	Root Summer glycyrrhizin low producing strain	0.015
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.259
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.294

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.281
SRR2868004	Drought Stress (root)	5.417
SRR2967015	Control (root)	1.517

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.000
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.131
SRR9715739	Root	0.203
SRR9715742	Root	0.256
SRR9715743	Root	0.358

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.018
SRR8749028	MeJA induced 9h	0.007
SRR8749029	MeJA induced 9h	0.017
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.203
SRR8400027	Control - Root	1.092