Gene detail information of Glyur000431s00018650.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32520.1 | 1.00E-99 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_006592808.1 | 1.34E-135 | PREDICTED: carboxymethylenebutenolidase homolog [Glycine max] |
| COG | YP_001156054.1 | 9.00E-41 | carboxymethylenebutenolidase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] |
| trEMBL | tr|I1LU40|I1LU40_SOYBN | 5.00E-136 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G31850.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00431 | 133126 | 135655 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01061 | E3.1.1.45 | EC:3.1.1.45 | Fluorobenzoate degradation | map00364 |
| Chlorocyclohexane and chlorobenzene degradation | map00361 | |||
| Toluene degradation | map00623 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000431s00018650.1 | PF01738.13 | DLH | 21 | 252 | 3.90E-47 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.505 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.111 |
| SRR2868004 | Drought Stress (root) | 0.091 |
| SRR2967015 | Control (root) | 0.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.317 |
| SRR9715740 | Leaf | 0.406 |
| SRR9715741 | Leaf | 1.397 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 2.177 |
| SRR8749029 | MeJA induced 9h | 1.464 |
| SRR8749030 | Uninduced | 0.334 |
| SRR8749031 | Uninduced | 1.087 |
| SRR8749032 | Uninduced | 4.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.082 |
| SRR8400027 | Control - Root | 0.022 |