Gene detail

Gene detail information of Glyur000431s00018632.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G05170.2	Galactosyltransferase family protein
NR	XP_003540300.1	PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoformX1 [Glycine max]
Swissprot	tr\|A8MRC7\|B3GT2_ARATH	Probable beta-1,3-galactosyltransferase 2
trEMBL	tr\|I1LU50\|I1LU50_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G31980.1}

Sequence

Transcript Sequence

>Glyur000431s00018632.1
AGAAGATGGAGGGAGAATCACAGAGGTGGATGGCATTCATGTCGTGGCAATGAACAGTTACTCAAGTTATCATTAAATTAAGGATGGCACTGACAGGGACAGTTTGGTAATATGCTATTATAAAACTGAGCGGTTACCAAGTCTTCTTTCACTTGCGTTGTGTTCAACGTCCCTTACCTGCAAAGACTGACTTAGAGAGAGAGAGAGAGAGGAGAGAGGGAGAGAGAGGGCACAAACACAAAGCAAAGAACAAGCATAGCGTGACAGAGGATAAAGAAAGGAACAACGAGAAGTAAAAAAAAGAAAAACAGAGCACCTCTCTCTGTTCTGATTCTTTCTCTGTTTCCTCACCTCTCTCTGTTCCTCTCTACTCTGCCTACACAACATCTTCTTCTTCTTTTCTAAGGTGCCCACTTTCAAATTTGCTTCCTTTCCTGCACCCTCTGCCTCCTTTTCCCACTGGGTTTCTATAGTTCGGTTGTGGAAACACGGTCTTGAACATGGCTTTTGCCTTCTNAGTGCCAAGTTAGAATATTTTTTTTGGAAAACATAAAACGATGACTTGGAAAAGCAGAGGAGAGCTTCTTCCTAGAAGCTTTATGACGCAGAAATGGGTGATTTTCCTGTGTCTTGGAAGCTTCTGTGCTGGGATGTTCTTCACCAACAGGATGTGGACTATTCCTGAACCTAANGGGCTTGCAAGGACAACAGCTATGGAAGCTGAAAAATTAAATTTAGTTTCAGAGGGTTGTAACTCGAGAATTTTGCAAGAGAAGGAAGTGAAGCGCGAAGCTAAAGGAATCTATAAGGATGCTTCCAAGACACATAATGCCATACAAAACCTGGACAAGACTATTTCAAATTTGGAGATGGAACTAGCTGCAGCAAAAGCAGCTCAGGAGTCTCTAAGAAGTGGTGCTCCTGTATCAGAAGATATCAAGCTAAATGAATCATCTGGCAAGAGAAGGTACCTAATGGTCATAGGAATTAACACTGCTTTTAGTAGCAGAAAAAGAAGAGACTCGGTTCGTGCCACCTGGATGCCACAAGGTTCATATGCCACATCAGGGGGTATCCTAGACAGAGCTATTGAAGCAGAAGATAAGAAGCATGGAGATTTCCTGAGGCTGGATCATGTTGAAGGGTACCTTGAATTGTCAGCAAAGACAAGGACCTACTTTGCCACTGCTGTTAACATGTGGGATGCTGACTTCTATATCAAAGTTGATGACGATGTTCATGTAAATATAGCAACACTTGGAGAAACTCTAGTTAGACACCGATCAAAACCACGGGTCTACATTGGATGCATGAAATCTGGGCCTGTTCTTTCTCAAAAAGGGGTAAGGTACCATGAACCAGAATACTGGAAATTTGGTGAGACTGGAAACAAGTACTTCCGTCATGCCACAGGACAATTGTATGCCATTTCAAAAGATCTGGCTACATATATTTCAGTTAACCGGCATGTTCTTCACAAGTATGCNAATGAGGATGTCTCACTGGGATCTTGGTTTATTGGACTTGATGTGGATCACATAGATGATCGAAGACTTTGCTGTGATTGTGAATGGAAGGCACAGGCAGGCAATGTTTGTGTTGCTTCATTTGATTGGACCTGCAGTGGAATTTGCAGGTCTGCTGAAAGGATTAGAGAGGTCCACAGGAGATGTGGGGAAGGTGAGAAGGCTTTGTGGAATGCCTCTTTCTAGGTGGCAGCTTTGAGTACTTCTTCCTAACTCAGGAAGATTATAACCACAGCAATGAAATTATAGGTTGCAAGATTTTTTTTTGCTTTTTTGTTTTTCTATATATCTTTTAGAATTATAGAGAAAATTTTCATTTTACACGAGATTAATTAGGAGATAGAGAGAGAGGAAGAGAAAAAAGGAAAGAAAGAGAGAAAGGACTAATTAGTAATTACCCCATGGACCTTCTGCGTATTAATAAAGTAGATNGACCATGGTAGCTACCAGAATATAAGAAGCATGGGATAGTCCCCTCAATCCATTCTTTTTGTGCTTGAAAGGGCCACTTTATCTGTTAATAGTTCCCATGATGCCTATCAAGCTCTTAATAAATATAAATATAGATATACATTTGGATGGCTGTTGCTGCCTTTGATTTCNTTCAAATCTGTTCGACAAAATTGAAATTATTTTTCAATCATTTCTTCAAATTCTATATTTTGCACGGTTAATATGTGATTCCACAAGGAAAAAAGTTATATAATTCACGAGTTCAGCCTACAAAGGCAAAGTGACTTGCCACTTTTTCTGTTAAACANATCCAATAAAATCCAAATAAAGTGGTGCAATATCAGAAAGCAATTGTTATGCCAAGTGCCAATTCTATTGGAGCACTATGCGGCTACCCTATGAAAATGCATTAGATGGATCCCCAATTCCCAAACCAAATGTGAAAAGGAAAAAGCCAAGACCTTCCATGTTTCCAACCTGGCCATAGCCAGTCAAAGTCCTTGATTGGACCTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00431	25354	30736	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT31

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006486 protein glycosylation

cellular_component
GO:0016020 membrane

molecular_function
GO:0008378 galactosyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000431s00018632.1	PF13334.1	DUF4094	17	112	1.20E-30
Glyur000431s00018632.1	PF01762.16	Galactosyl_T	152	330	5.40E-41

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.537
SRR1783600	control	14.351
SRR1783602	moderate drought stress	17.513
SRR1811619	moderate drought stress	17.448

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	16.782
DRR006520	Root Summer glycyrrhizin high producing strain	16.538
DRR006521	Root Winter glycyrrhizin high producing strain	177.607
DRR006522	Root Winter glycyrrhizin high producing strain	172.621
DRR006523	Root Summer glycyrrhizin low producing strain	26.325
DRR006524	Root Summer glycyrrhizin low producing strain	26.087
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.727
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.620

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	23.749
SRR2868004	Drought Stress (root)	38.087
SRR2967015	Control (root)	40.084

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.691
SRR9715740	Leaf	33.851
SRR9715741	Leaf	20.293
SRR9715739	Root	5.771
SRR9715742	Root	13.839
SRR9715743	Root	12.875

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	17.807
SRR8749028	MeJA induced 9h	46.381
SRR8749029	MeJA induced 9h	22.822
SRR8749030	Uninduced	139.830
SRR8749031	Uninduced	66.234
SRR8749032	Uninduced	43.206

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	51.904
SRR8400027	Control - Root	35.838