Gene detail information of Glyur000431s00018630 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004487413.1 | 1.93E-48 | PREDICTED: uncharacterized protein LOC101508271 [Cicer arietinum] |
| trEMBL | tr|I1M444|I1M444_SOYBN | 5.00E-48 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G38490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00431 | 3900 | 4271 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.334 |
| SRR1783600 | control | 27.697 |
| SRR1783602 | moderate drought stress | 10.530 |
| SRR1811619 | moderate drought stress | 9.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.403 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.540 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.180 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.911 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.618 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.534 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.557 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.314 |
| SRR2868004 | Drought Stress (root) | 7.714 |
| SRR2967015 | Control (root) | 11.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.152 |
| SRR9715740 | Leaf | 1.041 |
| SRR9715741 | Leaf | 1.216 |
| SRR9715739 | Root | 5.408 |
| SRR9715742 | Root | 2.182 |
| SRR9715743 | Root | 3.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.155 |
| SRR8749028 | MeJA induced 9h | 19.335 |
| SRR8749029 | MeJA induced 9h | 31.757 |
| SRR8749030 | Uninduced | 10.818 |
| SRR8749031 | Uninduced | 8.176 |
| SRR8749032 | Uninduced | 8.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.196 |
| SRR8400027 | Control - Root | 9.086 |