Gene detail information of Glyur000429s00022702 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44640.1 | 3.00E-123 | |
| NR | KHN10900.1 | 0 | hypothetical protein glysoja_041885 [Glycine soja] |
| Swissprot | tr|Q9M903|TGD4_ARATH | 2.00E-80 | Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic |
| trEMBL | tr|I1JMJ6|I1JMJ6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G24890.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00429 | 15676 | 19313 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.503 |
| SRR1783600 | control | 11.342 |
| SRR1783602 | moderate drought stress | 7.534 |
| SRR1811619 | moderate drought stress | 7.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.872 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.218 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.125 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.210 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.837 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.668 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.932 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.959 |
| SRR2868004 | Drought Stress (root) | 4.202 |
| SRR2967015 | Control (root) | 4.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.926 |
| SRR9715740 | Leaf | 6.425 |
| SRR9715741 | Leaf | 2.015 |
| SRR9715739 | Root | 4.198 |
| SRR9715742 | Root | 7.394 |
| SRR9715743 | Root | 7.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.828 |
| SRR8749028 | MeJA induced 9h | 3.127 |
| SRR8749029 | MeJA induced 9h | 2.570 |
| SRR8749030 | Uninduced | 0.258 |
| SRR8749031 | Uninduced | 0.264 |
| SRR8749032 | Uninduced | 0.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.566 |
| SRR8400027 | Control - Root | 10.535 |