Gene detail information of Glyur000428s00019757


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48040.13.00E-81RHO-related protein from plants 10
NRAFK47680.13.96E-118unknown [Lotus japonicus]
Swissprottr|Q6Z808|RAC3_ORYSJ2.00E-108Rac-like GTP-binding protein 3
trEMBLtr|I3T588|I3T588_LOTJA1.00E-118Uncharacterized protein {ECO:0000313|EMBL:AFK47680.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00428139615142845-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0007165  signal transduction

GO:0007264  small GTPase mediated signal transduction

GO:0015031  protein transport


cellular_component

GO:0005622  intracellular

GO:0016020  membrane


molecular_function

GO:0005525  GTP binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000428s00019757.1PF00071.17Ras1162302.10E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.434
SRR1783600control24.859
SRR1783602moderate drought stress22.286
SRR1811619moderate drought stress22.103

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.535
DRR006520Root Summer glycyrrhizin high producing strain35.980
DRR006521Root Winter glycyrrhizin high producing strain27.308
DRR006522Root Winter glycyrrhizin high producing strain25.452
DRR006523Root Summer glycyrrhizin low producing strain38.611
DRR006524Root Summer glycyrrhizin low producing strain38.137
DRR006525Leaf Summer glycyrrhizin high producing strain17.095
DRR006526Leaf Summer glycyrrhizin high producing strain18.073

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)37.153
SRR2868004Drought Stress (root)36.622
SRR2967015Control (root)47.194

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf8.804
SRR9715740Leaf7.931
SRR9715741Leaf12.851
SRR9715739Root9.924
SRR9715742Root17.954
SRR9715743Root14.245

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.629
SRR8749028MeJA induced 9h16.956
SRR8749029MeJA induced 9h13.949
SRR8749030Uninduced8.590
SRR8749031Uninduced2.846
SRR8749032Uninduced2.862

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root37.155
SRR8400027Control - Root35.341

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved