Gene detail

Gene detail information of Glyur000428s00019756

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G62890.3	0	Xanthine/uracil permease family protein
NR	XP_004501951.1	0	PREDICTED: nucleobase-ascorbate transporter 6-like isoform X1 [Cicer arietinum]
COG	YP_003736672.1	2.00E-73	xanthine/uracil permease family protein [Halalkalicoccus jeotgali B3]
Swissprot	tr\|Q27GI3\|NAT6_ARATH	0	Nucleobase-ascorbate transporter 6
trEMBL	tr\|I1KCI8\|I1KCI8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G19660.5}

Sequence

Transcript Sequence

>Glyur000428s00019756.1
ATTATAAACACTTTAATTAGATTGTTTATCTATTATTGTGTTACATTAAAATATGTTAACACATTATAGCTGTCAAGTGTGTAAGAGAGTGCCTACCCAAACATTCTCATACAACAATTTCGCAAATGAAGCATGACACAGAACAAAGCAACTAATGTGACATTGTGACCAATATTCGTTGGAAAAGGAATTAGGCTGAGAGGGAGAGAGGGAGTGAGTGAGTGTGTGAGAGTGAGAGTGAGAGTGAGAGAGAGAGGGGGGAGGTACATTATAAGCCTAGAGTGAGAGTGAGAGTGAGAAAGAGAAAGGGACTTTACTTTCTGGTAGCACAAGGGAGGAAAGAGAATCTTCATTCATTTTCTGCTCGTTTCTGTATACACCTTTATCGTTTCTCCCAGCATTGGAGTCTGCTTTACTCCACACTCCACAAATAACAATATCTGGCAGAGTTAGGAAGGAGTTATGGCAGGAGGAGGAGCACCCAAAGCAGATGAGCCACAGCCACACCCACCAAAGGATCAGCTACCAAATATTTCTTACTGCATTACAAGTCCTCCACCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTTTCTGGTGATGCTTGGCACAACTGTGCTCATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGAAATGAGGAGAAGGCCAAAGTTATTGAAACACTGCTCTTTGTTGCTGGTATTAACACACTGCTGCAAACACTCTTTGGAACTCGACTACCTGCAGTGATTGGAGGGTCTTATACCTTTGTGCCAACCACAATCTCAATTATTCTTGCTGGTCGATTCAGTGGTGAACCAGATCCNATAGAGAAATTCAAGAGGATAATGAGGGCAATCCAAGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTCAGTGGCCTCTGGCGTAATGTTGCAAGGTTCTTAAGTCCACTTTCATCAGTTCCTTTGGTAGCTCTTGTTGGTTTTGGCTTGTATGAGTTAGGTTTTCCCGGGGTTGCTAAATGTGTAGAGATTGGACTGCCGGAGCTTATATTGCTAGTATTTATTTCACAGTATGTGCCCCATGTGCTACATAAGGGGAAACATATCTTTGATCGTTTCGCTGTTATATTTACAATTGTAATTGTGTGGATATATGCTCATCTACTCACTGTTGGAGGGGCCTANAATGATGCTGCACCAAAAACACAGGCATCCTGCCGCACTGACCGTGCTGGACTTATAGATGCTGCTCCTTGGATAAGAGTTCCATATCCCTTTCAATGGGGAGCACCGACGTTTGATGCAGGTGAAGCATTTGCCATGATGATGGCATCTTTCGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCNGTATATAGGTATGCAAGTGCAACACCATTACCGCCTTCTATTCTTAGTCGGGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACAGTTAATGGATCGTCTGTGTCCGTAGAAAATGCAGGTCTTTTGGCTTTGACCCGTGTTGGCAGTAGAAGAGTTGTGCAAATATCTGCTGGGTTTATGATTTTCTTTTCAATTCTCGGAAAATTCGGAGCAGTTTTCGCCTCCATCCCACCTGCCATTGTTGCTGCTCTGTACTGCTTGTTCTTTGCTTATGTTGGTGCTGGAGGTCTTAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTCAGAACAAAGTTCATATTAGGCTTCTCCATCTTCTTGGGCTTGTCTGTGCCCCAGTACTTCAATGAGTACACTGCAATTAATGGTTTTGGTCCTGTCCACACAGGCGGAAGATGGTTCAATGACATAGTCAACGTCCCATTCCAATCAAAAGCATTTGTTGCGGGTTGTGTGGCATATTTCCTAGACAACACCTTACATAAGAGGGATTCAGCTATTAGAAAGGACAGAGGGAAACATTGGTGGGACAAGTACAAGTCCTTCAAGGGAGACACAAGAAGTGAGGAGTTCTATTCACTGCCATTCAATCTGAACAAGTACTTCCCATCTGTTTAATATTTTGTGCACAAGAGCTCAAAGGATAAGGTGGTTTCATCTTCACCAANAGTCTAGTTCTCTAATATCAGATTGAATCTTATTTTACACGCTATAGCCATTCCCACTCTATTATAGCATTTTGTAAAACATTGCCGTTGTTTTTGTAAATTCTGATCAAGAAAGTGGATTGACGTAGTAAATGTGCATGCTTAATTTTTCTTATGTCATGTTCACTTCAGAATCCCCCTGCCCCAAATCATACAATGCATTTTCTACCCCTATTATTTATTAATTATGTTATGATATTCATTTAAATTTTTACTCTTCCGCATAGGTTTCTGAATATCCTTCCTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00428	120667	127536	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006810 transport

GO:0055085 transmembrane transport

cellular_component
GO:0016020 membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000428s00019756.1	PF00860.15	Xan_ur_permease	36	440	3.00E-68

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	181.018
SRR1783600	control	181.459
SRR1783602	moderate drought stress	110.332
SRR1811619	moderate drought stress	109.837

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	253.608
DRR006520	Root Summer glycyrrhizin high producing strain	252.280
DRR006521	Root Winter glycyrrhizin high producing strain	0.538
DRR006522	Root Winter glycyrrhizin high producing strain	0.500
DRR006523	Root Summer glycyrrhizin low producing strain	139.903
DRR006524	Root Summer glycyrrhizin low producing strain	140.179
DRR006525	Leaf Summer glycyrrhizin high producing strain	32.645
DRR006526	Leaf Summer glycyrrhizin high producing strain	32.296

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	139.709
SRR2868004	Drought Stress (root)	90.590
SRR2967015	Control (root)	106.056

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	27.298
SRR9715740	Leaf	7.194
SRR9715741	Leaf	10.871
SRR9715739	Root	110.223
SRR9715742	Root	118.554
SRR9715743	Root	116.022

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.765
SRR8749028	MeJA induced 9h	9.618
SRR8749029	MeJA induced 9h	15.663
SRR8749030	Uninduced	0.465
SRR8749031	Uninduced	0.064
SRR8749032	Uninduced	0.915

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	399.630
SRR8400027	Control - Root	398.466