Gene detail information of Glyur000428s00019754 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50090.2 | 2.00E-32 | |
| NR | XP_003527030.1 | 5.32E-93 | PREDICTED: uncharacterized protein LOC100813476 [Glycine max] |
| trEMBL | tr|I1KCI9|I1KCI9_SOYBN | 2.00E-93 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G19670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00428 | 112671 | 114255 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000428s00019754.1 | PF14009.1 | DUF4228 | 1 | 195 | 1.20E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.103 |
| SRR1783600 | control | 14.166 |
| SRR1783602 | moderate drought stress | 11.492 |
| SRR1811619 | moderate drought stress | 11.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.981 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.198 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.446 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.435 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.505 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.702 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.511 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.385 |
| SRR2868004 | Drought Stress (root) | 6.378 |
| SRR2967015 | Control (root) | 14.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.500 |
| SRR9715740 | Leaf | 0.572 |
| SRR9715741 | Leaf | 1.737 |
| SRR9715739 | Root | 0.282 |
| SRR9715742 | Root | 11.975 |
| SRR9715743 | Root | 11.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 128.938 |
| SRR8749028 | MeJA induced 9h | 280.337 |
| SRR8749029 | MeJA induced 9h | 117.180 |
| SRR8749030 | Uninduced | 5.608 |
| SRR8749031 | Uninduced | 1.653 |
| SRR8749032 | Uninduced | 1.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.888 |
| SRR8400027 | Control - Root | 15.172 |