Gene detail information of Glyur000428s00019735 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G56070.1 | 4.00E-13 | Ribosomal protein S5/Elongation factor G/III/V family protein |
| NR | BAH57134.1 | 4.01E-14 | AT1G56070 [Arabidopsis thaliana] |
| Swissprot | tr|O23755|EF2_BETVU | 3.00E-13 | Elongation factor 2 |
| trEMBL | tr|C0Z355|C0Z355_ARATH | 1.00E-14 | AT1G56070 protein {ECO:0000313|EMBL:BAH57134.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00428 | 19201 | 19504 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 436.633 |
| SRR1783600 | control | 418.293 |
| SRR1783602 | moderate drought stress | 423.153 |
| SRR1811619 | moderate drought stress | 402.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 133.517 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 125.434 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 84.142 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 85.744 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 119.711 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 113.488 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 41.357 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 42.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 86.787 |
| SRR2868004 | Drought Stress (root) | 61.408 |
| SRR2967015 | Control (root) | 74.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.088 |
| SRR9715740 | Leaf | 15.917 |
| SRR9715741 | Leaf | 21.618 |
| SRR9715739 | Root | 77.903 |
| SRR9715742 | Root | 105.684 |
| SRR9715743 | Root | 96.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 51.157 |
| SRR8749028 | MeJA induced 9h | 126.891 |
| SRR8749029 | MeJA induced 9h | 27.217 |
| SRR8749030 | Uninduced | 10.749 |
| SRR8749031 | Uninduced | 11.531 |
| SRR8749032 | Uninduced | 6.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 117.795 |
| SRR8400027 | Control - Root | 108.046 |