Gene detail information of Glyur000426s00022741.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G17180.19.00E-78glutathione S-transferase TAU 25
NRXP_002532823.15.70E-103glutathione s-transferase, putative [Ricinus communis]
COGYP_007096787.15.00E-18glutathione S-transferase [Chamaesiphon minutus PCC 6605]
Swissprottr|Q03666|GSTX4_TOBAC1.00E-98Probable glutathione S-transferase
trEMBLtr|B9T3K4|B9T3K4_RICCO2.00E-103Glutathione s-transferase, putative {ECO:0000313|EMBL:EEF29553.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00426151608153272+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K00799GST, gstEC:2.5.1.18Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000426s00022741.1PF02798.15GST_N7761.70E-16
Glyur000426s00022741.1PF00043.20GST_C1011582.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.933
SRR1783600control17.560
SRR1783602moderate drought stress20.881
SRR1811619moderate drought stress19.140

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain51.164
DRR006520Root Summer glycyrrhizin high producing strain50.113
DRR006521Root Winter glycyrrhizin high producing strain255.925
DRR006522Root Winter glycyrrhizin high producing strain245.836
DRR006523Root Summer glycyrrhizin low producing strain148.484
DRR006524Root Summer glycyrrhizin low producing strain155.750
DRR006525Leaf Summer glycyrrhizin high producing strain344.476
DRR006526Leaf Summer glycyrrhizin high producing strain336.790

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)375.017
SRR2868004Drought Stress (root)1606.108
SRR2967015Control (root)544.822

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf688.285
SRR9715740Leaf985.818
SRR9715741Leaf1030.545
SRR9715739Root163.821
SRR9715742Root64.181
SRR9715743Root82.881

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h707.657
SRR8749028MeJA induced 9h1451.520
SRR8749029MeJA induced 9h1327.100
SRR8749030Uninduced5431.777
SRR8749031Uninduced2773.587
SRR8749032Uninduced3747.145

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root132.997
SRR8400027Control - Root94.593

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved