Gene detail information of Glyur000426s00022717 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78410.1 | 3.00E-10 | VQ motif-containing protein |
| NR | XP_006586400.1 | 4.82E-24 | PREDICTED: uncharacterized protein LOC102667869 [Glycine max] |
| trEMBL | tr|I1KUA7|I1KUA7_SOYBN | 9.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G18820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00426 | 10301 | 10669 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000426s00022717.1 | PF05678.9 | VQ | 18 | 45 | 5.40E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.299 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.297 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.252 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.892 |
| SRR2868004 | Drought Stress (root) | 2.493 |
| SRR2967015 | Control (root) | 1.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.319 |
| SRR9715740 | Leaf | 2.007 |
| SRR9715741 | Leaf | 3.742 |
| SRR9715739 | Root | 0.197 |
| SRR9715742 | Root | 0.320 |
| SRR9715743 | Root | 0.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.129 |
| SRR8749028 | MeJA induced 9h | 0.253 |
| SRR8749029 | MeJA induced 9h | 0.315 |
| SRR8749030 | Uninduced | 12.326 |
| SRR8749031 | Uninduced | 9.944 |
| SRR8749032 | Uninduced | 4.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.460 |
| SRR8400027 | Control - Root | 1.845 |