Gene detail

Gene detail information of Glyur000425s00021409

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G22610.1	0	Di-glucose binding protein with Kinesin motor domain
NR	XP_004512566.1	0	PREDICTED: geminivirus Rep-interacting motor protein-like [Cicer arietinum]
Swissprot	tr\|O81635\|ATK4_ARATH	5.00E-109	Kinesin-4
trEMBL	tr\|G7KGK0\|G7KGK0_MEDTR	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000425s00021409.1
ATGGACCCGATCCAATCGAACGATTTTCAGAATTACCCACAAACCCTAATCTCAGAGCATAATAAAGATTCAGTAATGGTAGATGTCGACGAGTCCTTGTTCGATTCGATTGTTTGTGACTCCAGTTCAAGACTAATCCCAACTGGGTTTACGAGATCTGAAAACGCAGAGGAGGAGTATATCATGTTTGTAAATGCGGGAGGGGAAGCTTTCAATGAAGCAGCTGATGGAGTAAAGTTCCTAGGCGACACCTTTTTCGATGGTGGCAACGTTTTGCGTACCGATGAGCAAATAGTGGAGGGTGGAGATTACCCATTTATCTATCAATCAGCTCGGTTGGGGATTTTTTGTTATAGAATTGATAATCTTCCTCCTGGAGACTATCTTGTCGACCTTCATTTTGTGGAGATCATTAACATAAATGGGCCAAAAGGAATGAGGGTTCTATCTGAATTGGACATTTATGCTGTTGTTGGAGCCAACAAGCCACTACAGTTGATTGATTCCAGGGTGGCTGTGAAGGATGATGGGGTAATTCTCATACGGTTCGAAAGTATAAATGGAAGCCCAGTTGTTAGTGGGATTTGCATTAGGAGAGCGTCAAAGGCATCAGTTCCACCGGTGACAAATGATTACATTAAATGTAACTACTGTGATGCGCAGATTGAAATTCCTTCCTCACAGATGAAAGTTATGCAGACAAAATCTACTGCAAAGTATGAAAATAGGATAAAGGAGCTAACAATGCAGTGTGAGCTCAAGGCAAAAGAATGCTATGAGGCATGGATGTCATTAACTGCAACGAATAAGCAGTTGGAAAAAGTNCAGATGGAGCTTGACCAAGCGACATTTAAGTCACTCACTACTGAACAAACTGTGGAGAAACAAGCCGAGAGCCTGAGGAGTATTTCTAACAGGTATGANCTGGAGAAGAAGAAATGGGCAGAAGCAATTAGCAGTTTACAGGAAAAAGTAAAGTTGATGAAGAGTGATTATGTTCAACTTTCCCATGAAGCACATGAATGTGTTGATTCAATCCCTGAATTAAATAACATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAATGAAGAGATGACACTGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTTTTCTGCCGTTGTCGTCCATTAAACAAGGTTGAAATGTCAGCTGGGTGTACAACTGTTGTGGACTTCGATGCAGCGAAAGATGGATGTCTTGGAATTTTGACAAATGGCTCCACCAAAAAATCATTCAGATTTGACAGGGTGTATACACCAAAAGATGACCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAGTCTCTGTGCTGGATGGCTACAACGTTTGCATCTTTGCTTATGGGCAAACAGGAACAGGAAAGACATTCACCATGGAAGGAACAGAGCAGAATAGAGGAGTCAATTACAGGACTCTTGAGCACTTGTTTAAAATTAGTAAGGAAAGGAGTGAAACATTTTCATATGACATATCTGTTAGTGTGCTTGAGGTTTATAATGAACAAATCAGAGACCTATTGGCTACGGGACAAACATCAAAAAGGTTGGAGATAAAACAAAGCTCTGAAGGATTTCATCATGTTCCTGGTGTTGTAGAAGCCAAGGTTGATAACATAAATGATGTGTGGAACGTTCTGCAGGCTGGAAGTAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAGCATAGCAGTCGATCTCATTGCATGCTATGTATAATGGTAAGGGCCAAAAATTTGATGAATGGCGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGCGAAGACTGAAGTGCAAGGGGAGCGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCTCTCGGAGATGTGATATCCTCTCTAGCAGCCAAAAGTAGTCACATTCCATATAGGAACTCTAAGTTGACACATTTACTTCAAGACTCACTAGGAGGTGACTCTAAAACTTTGATGTTTGTACAAATAAGTCCATCAGACCAGGACCTGGGTGAGACTCTGAGCTCACTGAATTTCGCCACTAGAGTGAGGGGCATCGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAAGTGAACTTCAAAAAATGAAAGCAATGCTTGAAAAAGTGCGCAGTGAGTGCAGAAATAAAGATGAAAATGTGCGGAAACTAGAAGAAAGTTTGCAAAGCATGGAGAGTAAGGCAAAAGGCAAGGATAATATTCACAGAAATCTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGTTGAAAACATCCATGCAAAACCAGTCAGAGAAACAAATTTCTCAGTTATCTGAAAAACTGAAGGGAAAAGAAGATACCTGCTGTACTCTCCAACACAAGGTCAAAGATCTAGAGAAAAAACTAAGAGAACAACTGCAGTCAGAGACAGCCAGTTTTCAACAGAAGTTCAAAGAAAAGTTAAGACAGTTCTTCTATGTTAAGCAGGTTTGGGATCTAGAAAAGAAGCTGAAAGATCAGTTGCAAGGGTCTGAGTCTGAGTCTGCCATTCTAAGAGATAAGGTCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAACAGAANTCAGAGTCCTTGCTTAAACAACAGATGAAGGAACTAGAGGAGAGGTACAAAGAGAGAGAGCAACAGTGGCAACAAACCCATTGTTATGTTGAAGCAGCAGTGAAGGCGGCCGCCACACCTGACATAGGTAAAAGCTGCACAAGTGATGAATGTCCAAGCGAAATTGAGGCTCGCGTTTTGAGTAGTTCAAACTTGGCGAATCGCCAGATAAGTCAAGGTTCTGCTGCTTTGTTCAAAGGGAATGATTCTTCTACTCATCAGATAAGAAACAAAAGAGTGTTCAGAAGCAATGAAACAGAAAACAATTTTGCCATGCCATCCTCTCTGCATGATAGAAAAATCACAAGGAAATCCGATCCACCTAAAATAGTACGGACTGGGAGGCCAGCAACAAAGCCAGTCATTGCTACTCAAGCTCCATTATCTCACAAGAGAGCTAGCACAAGCAGAGATCAGGCTCAAGGAATTAGAGAGAGGGATAGTAAGAAAAAAATCTGGTCAAGATAG

Protein Sequence

>Glyur000425s00021409.1
MDPIQSNDFQNYPQTLISEHNKDSVMVDVDESLFDSIVCDSSSRLIPTGFTRSENAEEEYIMFVNAGGEAFNEAADGVKFLGDTFFDGGNVLRTDEQIVEGGDYPFIYQSARLGIFCYRIDNLPPGDYLVDLHFVEIININGPKGMRVLSELDIYAVVGANKPLQLIDSRVAVKDDGVILIRFESINGSPVVSGICIRRASKASVPPVTNDYIKCNYCDAQIEIPSSQMKVMQTKSTAKYENRIKELTMQCELKAKECYEAWMSLTATNKQLEKVQMELDQATFKSLTTEQTVEKQAESLRSISNRYXLEKKKWAEAISSLQEKVKLMKSDYVQLSHEAHECVDSIPELNNMVFAVQELVKQCEDLKVKYNEEMTLRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSAGCTTVVDFDAAKDGCLGILTNGSTKKSFRFDRVYTPKDDQVDVFADASSMVVSVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFKISKERSETFSYDISVSVLEVYNEQIRDLLATGQTSKRLEIKQSSEGFHHVPGVVEAKVDNINDVWNVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVRAKNLMNGECTKSKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDLGETLSSLNFATRVRGIELGPVKKQIDTSELQKMKAMLEKVRSECRNKDENVRKLEESLQSMESKAKGKDNIHRNLQEKIKELEGQIELKTSMQNQSEKQISQLSEKLKGKEDTCCTLQHKVKDLEKKLREQLQSETASFQQKFKEKLRQFFYVKQVWDLEKKLKDQLQGSESESAILRDKVKELERKLKEQEQXSESLLKQQMKELEERYKEREQQWQQTHCYVEAAVKAAATPDIGKSCTSDECPSEIEARVLSSSNLANRQISQGSAALFKGNDSSTHQIRNKRVFRSNETENNFAMPSSLHDRKITRKSDPPKIVRTGRPATKPVIATQAPLSHKRASTSRDQAQGIRERDSKKKIWSR

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00425	142612	148653	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000425s00021409.1	PF11721.3	Malectin	60	195	9.30E-12
Glyur000425s00021409.1	PF00225.18	Kinesin	396	712	5.10E-110

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.169
SRR1783600	control	1.182
SRR1783602	moderate drought stress	1.003
SRR1811619	moderate drought stress	0.983

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.152
DRR006520	Root Summer glycyrrhizin high producing strain	3.159
DRR006521	Root Winter glycyrrhizin high producing strain	0.134
DRR006522	Root Winter glycyrrhizin high producing strain	0.102
DRR006523	Root Summer glycyrrhizin low producing strain	0.591
DRR006524	Root Summer glycyrrhizin low producing strain	0.673
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.251
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.286

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.561
SRR2868004	Drought Stress (root)	6.192
SRR2967015	Control (root)	7.727

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.957
SRR9715740	Leaf	0.486
SRR9715741	Leaf	0.785
SRR9715739	Root	0.092
SRR9715742	Root	0.455
SRR9715743	Root	0.420

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.198
SRR8749028	MeJA induced 9h	5.531
SRR8749029	MeJA induced 9h	4.530
SRR8749030	Uninduced	0.090
SRR8749031	Uninduced	0.098
SRR8749032	Uninduced	0.212

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.830
SRR8400027	Control - Root	6.151