Gene detail information of Glyur000424s00026906 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38130.2 | 3.00E-68 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_004493084.1 | 9.06E-105 | PREDICTED: N-alpha-acetyltransferase 30-like [Cicer arietinum] |
| COG | NP_127348.1 | 5.00E-09 | N-terminal acetyltransferase [Pyrococcus abyssi GE5] |
| Swissprot | tr|O80438|MAK3_ARATH | 1.00E-85 | N-alpha-acetyltransferase MAK3 |
| trEMBL | tr|I1N4X7|I1N4X7_SOYBN | 5.00E-102 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G51670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00424 | 150256 | 154020 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000424s00026906.1 | PF00583.19 | Acetyltransf_1 | 106 | 148 | 2.20E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.081 |
| SRR1783600 | control | 12.737 |
| SRR1783602 | moderate drought stress | 13.939 |
| SRR1811619 | moderate drought stress | 14.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.778 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.037 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.804 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.464 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.402 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.824 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.231 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.564 |
| SRR2868004 | Drought Stress (root) | 11.772 |
| SRR2967015 | Control (root) | 10.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.055 |
| SRR9715740 | Leaf | 9.620 |
| SRR9715741 | Leaf | 8.571 |
| SRR9715739 | Root | 3.238 |
| SRR9715742 | Root | 9.839 |
| SRR9715743 | Root | 6.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.127 |
| SRR8749028 | MeJA induced 9h | 18.227 |
| SRR8749029 | MeJA induced 9h | 30.236 |
| SRR8749030 | Uninduced | 13.719 |
| SRR8749031 | Uninduced | 16.508 |
| SRR8749032 | Uninduced | 15.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.639 |
| SRR8400027 | Control - Root | 15.815 |