Gene detail information of Glyur000423s00024440 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08530.1 | 2.00E-57 | |
| NR | AFK47050.1 | 5.16E-139 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T3F8|I3T3F8_LOTJA | 2.00E-139 | Uncharacterized protein {ECO:0000313|EMBL:AFK47050.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00423 | 90807 | 94020 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.477 |
| SRR1783600 | control | 26.765 |
| SRR1783602 | moderate drought stress | 23.294 |
| SRR1811619 | moderate drought stress | 22.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.549 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.102 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.560 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.011 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.446 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.747 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 42.338 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 42.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.051 |
| SRR2868004 | Drought Stress (root) | 14.944 |
| SRR2967015 | Control (root) | 13.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.836 |
| SRR9715740 | Leaf | 48.264 |
| SRR9715741 | Leaf | 37.206 |
| SRR9715739 | Root | 9.227 |
| SRR9715742 | Root | 10.065 |
| SRR9715743 | Root | 12.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.852 |
| SRR8749028 | MeJA induced 9h | 14.366 |
| SRR8749029 | MeJA induced 9h | 18.641 |
| SRR8749030 | Uninduced | 7.578 |
| SRR8749031 | Uninduced | 7.182 |
| SRR8749032 | Uninduced | 6.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.677 |
| SRR8400027 | Control - Root | 26.547 |