Gene detail

Gene detail information of Glyur000422s00020641.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G08500.1	1.00E-120	MAPK/ERK kinase kinase 1
NR	XP_003523467.1	0	PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Glycine max]
COG	YP_643511.1	2.00E-25	serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprot	tr\|Q39008\|M3K1_ARATH	3.00E-173	Mitogen-activated protein kinase kinase kinase 1
trEMBL	tr\|I1JZA5\|I1JZA5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G43270.1}

Sequence

Transcript Sequence

>Glyur000422s00020641.1
CTAAAACAAACACACACTTGGTCGTCGATGTGGCACCGCGTTTTCTGTTTCCTGTTCAACAGCGTTTACCAGTCGCTTCTTTGCCGCAGTCTTCTCCCCCTTTTCTTTTTCCTCTCCATCCTCTCCTCAGTCCCCAACCCCCTTTCTATCTGGTCNGCTCCGTTTACTNTATCTCCCGTCTCAACTCANTGCTTCGGTTTCTCACCTGAAACCGCAAGAGAGACAAAGAGAGAATCAATAAAACCTCCCTTCCAACTTCCTTCAACTTTCTCATTAGAACTTAGAAGGAACCACAAGTCCAAAACCAGCTCAATAATTCTCGAAGCTATTCCTTTTACCGTTTTAGATGGATCTAGGTTTAATTCTCCATGCATCGGATTTTCGGCCATAGAAAGCGAACCACCACAATGGATTCCAACAACAAGAAGCTCCGAAGGAAACCAAAGCTCGAGCGCCGTAATGCACTCAAGTACTTCGAATACGACGCCGGATCGTCCTCCTCCTCCCTCGACTCCTCCTCCTCCGGTTCGCTCTACACTCGTTCCATGGACTTCTACGACCGTACCAGCTTCCGTATTGAAGGTGTCGAGGGCGAGTTCGATCGAATTTGTAGGAGTTTAGGGCTCTCTGGACCTGAAGACTTCGCTATTCCCGCTGCTGCTTGGGAGGCCATGAAGGTCCGATCCTCTTCGGATGTTCTCCCGAGGTTGAAGCTCGACGAGCTTGATCTTCAGGAGAAGGAAGAGCCGAAGGAGGGAAACGTAGCAGAGGAAGAAGAAGGTGAATTATTGAGTGAAGAGACGGTTAGGGTTAAGGTTAGAGACGTGGATGATGATTCGGGTGGTGGAGATGAGGTTGTTGCTGAGACTGNAAGTGTTGGTGTTGGTGTTGGTGGGGGTGGGGGTATCAATGGGGTTCGTCCACCGATGCTTAAGCCACCACCAGCGATGAGGGTTCCGATTGTTGATAACACGAGTTCCACTTGGGACCTTTTGAGGGATTTGGGTGGTGGTGAAAAAGGGATTTTCCACGTGGCGGAGAGAGAAGAAGACGGGGAAGTTGGTAACAGAGAAGAGGAAGTTGGGGTGGTGGTGGTGGTGGATAATAATGCGGCAAGGATTGCGGAGATTGTTGCTGGCCTCTCGGAATCGTGTTCGTTTACTACGTCGAATGAAGATGATTCTTCTAGCTCTGCAACGGAACCTAGGTCCAATTATGTTTCTCCTAACGGGAGAATCAAGCGTGTTATTACCCCTAGCCGCTGGCAAAAGGGTGAGTTCTTAGGAGGTGGCTCGTTTGGATCCGTCTACGAAGGAATTTCCGATGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGAGTCAGGGAAAACAAAGTGTCNTTCAACTGGAGCAGGAAATTGAACTTTTGAGTCGATTTGAGCATGAAAATATAGTCCAATACTATGGCACTGAAATGGATGAATCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCCCTTAGAAGCCTCTATCAGAGGTATACTCTTCGAGATTCCCAAGNATGTGCCTATACAAGGCAAATTCTGCACGGTTTGAAGTATCTTCATGATCAAAATGTGGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGGTTAGCAAAGGCAACCAAATTGAATGATGTTAAATCAATGAAGGGAACAGCATTCTGGATGGCCCCTGAGGTTGTGAAAGGAAAGAATCAAGGTTATGGGCTTCCAGCTGATATGTGGAGTCTAGGATGCACTGTACTGGAGATGCTAACGCGCCAAATTCCGTACTCCGAATTGGAATGTATGCAGGCATTATTTAGAATTGGAAAAGGTGAGCGACCTTCTATTCCNGATTCTCTTTCAAGAGATGCACAGGATTTTATCCTGCAGTGCCTTCAAGTTAATCCAGATGATCGTCCTACTGCTGCTCAACTCTTAAACCATCCATTTGTCCAAAGGCCAATTTCCCAGTCTTCATTTCCTTTGAGCAACCATGGCAGAAGGGGTTAAACTTTGTCATCTTCAACTATGAAACACAATGGAGGNAGTTCTGTCGGTCATTGCATGTAGCAATGTAATATTTCCAATTTTCAGTTTGCTGGGAGTTGATATGGGGGTCCATTGTTGCAGCAATTGCGCGTGATGTGGCACTCAGGGTTTGCTTGTTTGTAACTTAAAATAGATTTTTGAGCACTGCTTCGGATCAAGTGATATGGCGCTCCAGAGAACCAAGTTATCAACTTGGCAATGTGCTTCTGGATAATTATGCTCAATATGTGTTGTTTAATTACTCAATGATGATTTGTCCATCGTAGCAAAGGTAAAATATCAACGTCGAGCGGAAAGAAGTTACCGCCGCCTTCCCCTTAAACTAGCTAACCGGTGAAAAAATCTACAGGGCTTAGCTTTCGGAGCAATTGTAGCAAGAATCGGAGAGGCATTCTATTTGTACATATTATTATTATTATTATTATTATTATTATTATTTATTAGCATGCCATTGTTTGTGTATATTTATATTTCGAAGTTTGTAGTTTTCTAATCTTCTTTTTCCATTCCATTTGTTTTAATCCATGTTTAATGTTTCCCACTTGCTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00422	89450	96249	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.1.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K13414	MEKK1	EC:2.7.11.25	MAPK signaling pathway - plant	map04016
			Plant-pathogen interaction	map04626

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000422s00020641.1	PF00069.20	Pkinase	299	552	8.40E-67

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.195
SRR1783600	control	12.078
SRR1783602	moderate drought stress	12.680
SRR1811619	moderate drought stress	12.631

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	17.564
DRR006520	Root Summer glycyrrhizin high producing strain	17.602
DRR006521	Root Winter glycyrrhizin high producing strain	19.603
DRR006522	Root Winter glycyrrhizin high producing strain	18.894
DRR006523	Root Summer glycyrrhizin low producing strain	27.759
DRR006524	Root Summer glycyrrhizin low producing strain	27.603
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.860
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.909

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	26.584
SRR2868004	Drought Stress (root)	36.169
SRR2967015	Control (root)	30.817

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	40.885
SRR9715740	Leaf	30.600
SRR9715741	Leaf	54.205
SRR9715739	Root	17.538
SRR9715742	Root	34.968
SRR9715743	Root	31.548

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.186
SRR8749028	MeJA induced 9h	30.454
SRR8749029	MeJA induced 9h	14.769
SRR8749030	Uninduced	36.523
SRR8749031	Uninduced	26.127
SRR8749032	Uninduced	16.964

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	27.034
SRR8400027	Control - Root	28.331