Gene detail information of Glyur000422s00020634 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G36940.1 | 3.00E-13 | |
| NR | XP_003601128.1 | 5.71E-63 | hypothetical protein MTR_3g073330 [Medicago truncatula] |
| trEMBL | tr|G7J3P5|G7J3P5_MEDTR | 2.00E-63 | Uncharacterized protein {ECO:0000313|EMBL:AES71379.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00422 | 30648 | 31346 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.859 |
| SRR1783600 | control | 1.829 |
| SRR1783602 | moderate drought stress | 2.325 |
| SRR1811619 | moderate drought stress | 2.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.962 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.383 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.381 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.982 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.559 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.565 |
| SRR2868004 | Drought Stress (root) | 27.226 |
| SRR2967015 | Control (root) | 23.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 91.817 |
| SRR9715740 | Leaf | 99.611 |
| SRR9715741 | Leaf | 82.994 |
| SRR9715739 | Root | 18.875 |
| SRR9715742 | Root | 25.516 |
| SRR9715743 | Root | 14.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.011 |
| SRR8749028 | MeJA induced 9h | 1.229 |
| SRR8749029 | MeJA induced 9h | 0.860 |
| SRR8749030 | Uninduced | 26.393 |
| SRR8749031 | Uninduced | 0.268 |
| SRR8749032 | Uninduced | 0.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.917 |
| SRR8400027 | Control - Root | 13.851 |