Gene detail information of Glyur000421s00024810 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26890.5 | 8.00E-74 | |
| NR | XP_003548978.1 | 0 | PREDICTED: uncharacterized protein LOC100819038 isoform X1 [Glycine max] |
| trEMBL | tr|I1MLD2|I1MLD2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G05600.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00421 | 70280 | 76782 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000421s00024810.1 | PF13915.1 | DUF4210 | 449 | 508 | 2.10E-17 |
| Glyur000421s00024810.1 | PF13889.1 | Chromosome_seg | 727 | 806 | 1.80E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.005 |
| SRR1783600 | control | 15.821 |
| SRR1783602 | moderate drought stress | 22.467 |
| SRR1811619 | moderate drought stress | 22.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.912 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.164 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 56.837 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 56.118 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.207 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.054 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.057 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.375 |
| SRR2868004 | Drought Stress (root) | 39.253 |
| SRR2967015 | Control (root) | 44.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.029 |
| SRR9715740 | Leaf | 20.233 |
| SRR9715741 | Leaf | 16.878 |
| SRR9715739 | Root | 3.230 |
| SRR9715742 | Root | 14.581 |
| SRR9715743 | Root | 13.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 64.572 |
| SRR8749028 | MeJA induced 9h | 103.413 |
| SRR8749029 | MeJA induced 9h | 110.187 |
| SRR8749030 | Uninduced | 58.364 |
| SRR8749031 | Uninduced | 211.855 |
| SRR8749032 | Uninduced | 199.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.997 |
| SRR8400027 | Control - Root | 20.420 |