Gene detail information of Glyur000421s00024809 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G05440.1 | 1.00E-122 | temperature sensing protein-related |
| NR | XP_004488280.1 | 0 | PREDICTED: cell division cycle protein 123 homolog [Cicer arietinum] |
| trEMBL | tr|I3SUB9|I3SUB9_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK43861.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00421 | 59884 | 60897 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000421s00024809.1 | PF07065.9 | D123 | 14 | 310 | 3.30E-90 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.393 |
| SRR1783600 | control | 36.238 |
| SRR1783602 | moderate drought stress | 31.694 |
| SRR1811619 | moderate drought stress | 31.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.988 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.551 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.203 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.727 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.194 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.635 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.863 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.484 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.813 |
| SRR2868004 | Drought Stress (root) | 24.900 |
| SRR2967015 | Control (root) | 25.843 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.210 |
| SRR9715740 | Leaf | 20.582 |
| SRR9715741 | Leaf | 19.646 |
| SRR9715739 | Root | 19.514 |
| SRR9715742 | Root | 35.753 |
| SRR9715743 | Root | 31.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.255 |
| SRR8749028 | MeJA induced 9h | 32.310 |
| SRR8749029 | MeJA induced 9h | 37.802 |
| SRR8749030 | Uninduced | 18.916 |
| SRR8749031 | Uninduced | 35.518 |
| SRR8749032 | Uninduced | 39.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.660 |
| SRR8400027 | Control - Root | 18.047 |