Gene detail information of Glyur000421s00024803 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003624429.1 | 2.57E-07 | hypothetical protein MTR_7g083120 [Medicago truncatula] |
| trEMBL | tr|G7KW47|G7KW47_MEDTR | 1.00E-07 | CASP-like protein {ECO:0000256|RuleBase:RU361233} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00421 | 27666 | 29243 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 120.633 |
| SRR1783600 | control | 122.309 |
| SRR1783602 | moderate drought stress | 24.062 |
| SRR1811619 | moderate drought stress | 25.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.351 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 49.215 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.460 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.860 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 52.544 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 54.053 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.034 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.587 |
| SRR2868004 | Drought Stress (root) | 12.209 |
| SRR2967015 | Control (root) | 18.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.939 |
| SRR9715740 | Leaf | 35.394 |
| SRR9715741 | Leaf | 29.902 |
| SRR9715739 | Root | 4.680 |
| SRR9715742 | Root | 14.123 |
| SRR9715743 | Root | 8.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 71.773 |
| SRR8749028 | MeJA induced 9h | 32.856 |
| SRR8749029 | MeJA induced 9h | 44.413 |
| SRR8749030 | Uninduced | 16.580 |
| SRR8749031 | Uninduced | 19.319 |
| SRR8749032 | Uninduced | 20.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.975 |
| SRR8400027 | Control - Root | 23.192 |