Gene detail information of Glyur000420s00021420 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29290.1 | 4.00E-09 | |
| NR | XP_003629833.1 | 4.57E-38 | hypothetical protein MTR_8g087390 [Medicago truncatula] |
| trEMBL | tr|G7L786|G7L786_MEDTR | 2.00E-38 | Transmembrane protein, putative {ECO:0000313|EMBL:AET04309.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00420 | 35380 | 35691 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.234 |
| SRR1783600 | control | 0.292 |
| SRR1783602 | moderate drought stress | 4.479 |
| SRR1811619 | moderate drought stress | 3.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.874 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.716 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.091 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.321 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.972 |
| SRR2868004 | Drought Stress (root) | 4.098 |
| SRR2967015 | Control (root) | 0.761 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.316 |
| SRR9715740 | Leaf | 0.177 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 7.456 |
| SRR9715742 | Root | 0.099 |
| SRR9715743 | Root | 1.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 421.235 |
| SRR8749028 | MeJA induced 9h | 204.565 |
| SRR8749029 | MeJA induced 9h | 376.115 |
| SRR8749030 | Uninduced | 8.705 |
| SRR8749031 | Uninduced | 35.443 |
| SRR8749032 | Uninduced | 21.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.934 |
| SRR8400027 | Control - Root | 1.557 |